Rhodococcus rhodochrous: 4535765_02371
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Entry
4535765_02371 CDS
T05521
Symbol
gabD6
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P)+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00250
Alanine, aspartate and glutamate metabolism
rrt00310
Lysine degradation
rrt00350
Tyrosine metabolism
rrt00650
Butanoate metabolism
rrt00760
Nicotinate and nicotinamide metabolism
rrt01100
Metabolic pathways
rrt01120
Microbial metabolism in diverse environments
Module
rrt_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
4535765_02371 (gabD6)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
4535765_02371 (gabD6)
00310 Lysine degradation
4535765_02371 (gabD6)
00350 Tyrosine metabolism
4535765_02371 (gabD6)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
4535765_02371 (gabD6)
Enzymes [BR:
rrt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
4535765_02371 (gabD6)
1.2.1.20 glutarate-semialdehyde dehydrogenase
4535765_02371 (gabD6)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
4535765_02371 (gabD6)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
Flavoprotein
DUF1487
Motif
Other DBs
NCBI-ProteinID:
SNV19186
LinkDB
All DBs
Position
1:complement(2559443..2560930)
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AA seq
495 aa
AA seq
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MTDATIVGTRVGVSDAVSRVSTGLFIDGEWVESSSGERFEVVAPATEEVVATVANGNADD
ARRAIETCARVQKHWAKTAPRERSVILRRAYELIMERQDEFATIMTTEMGKPFAEAKGEV
DYAAEFFRWFSEEAVRIGGDVTSTGDGATRILVSKEPVGPCVLVTPWNFPLAMGTRKIGP
AIAAGCTIVFKPSELTPLTSLALVDVLVEAGVPKGVLNVVPTTAPGEVVSAWMSSGIARK
VSFTGSTAVGIRLLEQASQHVMRSSMELGGNAPFIVFEDADLDRAVDGALAAKMRNMGEA
CTAANRIFAQRAVADRFAEKLAARMDALAVGDGLVEGTQVGPLVEEKALTKVERLVADAV
ERGARVVCGGSRPEGPGYFYPPTVLADVSKDAALMSEEIFGPVAPIVVFDTEDEVVEIAN
NTPWGLAGYIFTQDVDRSFRVSEALEVGMVGLNTGIVSNPAAPFGGIKASGLGREGSTIG
IDEFLEVKYVAVPRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgcaacgattgtcggaacacgggtgggcgtctccgacgcagtgtcccgcgtc
agcacaggattgttcatcgacggtgagtgggtcgaatcgagctccggtgaacgattcgag
gtcgtcgccccggcgaccgaggaggtcgtcgcgaccgtcgcgaacggcaacgccgacgac
gcccggcgtgccatcgaaacctgcgcccgcgtgcagaagcactgggcgaagaccgctccg
cgcgaacgcagcgtgatccttcgccgggcctacgagctcatcatggagcggcaggacgag
ttcgcgaccatcatgaccaccgagatgggcaaacccttcgccgaggcgaagggcgaggtg
gactacgctgcggagttcttccggtggttctccgaggaagccgtccgcatcggcggcgat
gtgaccagcaccggcgacggcgcgacccgcatcctggtgtccaaggagccggtgggaccc
tgcgtcctcgtcacaccgtggaacttcccgctggccatgggtacccgcaagatcggaccc
gccatcgcggccgggtgcaccatcgtcttcaaaccctcggagctgacgccgttgacctcg
ctggccctggtcgacgtgctcgtcgaggccggtgtgccgaagggtgtgctgaacgtcgtg
cccaccaccgcgcccggggaggtcgtctcggcctggatgtccagcggtatcgcacgcaag
gtcagtttcaccgggtcgaccgcggtgggcatccgattgctcgaacaggcatcccagcac
gtgatgcggagttcgatggaactgggaggaaatgccccgttcatcgtgttcgaggacgcg
gatctcgaccgggccgtcgacggcgcgctcgccgcgaagatgcgcaacatgggtgaggcg
tgcaccgccgcgaaccgcatcttcgcgcagcgcgcggtcgccgatcggttcgcggagaag
cttgctgcccgtatggatgccctggccgtcggggacggcctggtcgagggcacccaggtc
ggtccgctggtcgaggagaaggctctgacgaaggtggagcgtctcgtcgccgatgccgtc
gaacgtggagcacgcgtcgtgtgtggcggcagccggcccgagggacccggctacttctac
ccacccaccgtcctcgccgacgtgtcgaaggacgccgcgttgatgagcgaggagatcttc
gggccggtcgcgcccatcgtcgtcttcgataccgaggacgaggtcgtcgagatcgccaac
aacacgccctggggactggccggatacatcttcacccaggacgtcgaccgcagttttcgt
gtcagcgaagcgctcgaggtcggcatggtcgggctgaacaccggcatcgtgtccaacccc
gcggcaccgttcggcggtatcaaggcgtcgggtctcggacgtgagggaagcaccatcggc
atcgacgagttcctcgaggtcaagtacgtcgcggtcccccgtaggtga
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