Rhodococcus rhodochrous: 4535765_02423
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Entry
4535765_02423 CDS
T05521
Symbol
fadD_6
Name
(GenBank) putative fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00061
Fatty acid biosynthesis
rrt00071
Fatty acid degradation
rrt01100
Metabolic pathways
rrt01212
Fatty acid metabolism
rrt02024
Quorum sensing
rrt04146
Peroxisome
Module
rrt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
4535765_02423 (fadD_6)
00071 Fatty acid degradation
4535765_02423 (fadD_6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4535765_02423 (fadD_6)
09145 Cellular community - prokaryotes
02024 Quorum sensing
4535765_02423 (fadD_6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rrt01004
]
4535765_02423 (fadD_6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrt04147
]
4535765_02423 (fadD_6)
Enzymes [BR:
rrt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
4535765_02423 (fadD_6)
Lipid biosynthesis proteins [BR:
rrt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
4535765_02423 (fadD_6)
Exosome [BR:
rrt04147
]
Exosomal proteins
Exosomal proteins of breast milk
4535765_02423 (fadD_6)
Exosomal proteins of breast cancer cells
4535765_02423 (fadD_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
SNV19417
LinkDB
All DBs
Position
1:2615896..2617359
Genome browser
AA seq
487 aa
AA seq
DB search
MPVSRFPFLPWNVPTEDRSRTAVRDDRFELTYAQLDDRTRAVAAQFARHGVGAGDIVAIM
LPNRVELLVAMLAAWRLGAAATPVNPAFTESEASYQISDSGAVLVVNASVDAPDGGRPSI
AADDLAGEGDGPEPVALRGDELGLVIYTSGSTGRPKGVMLDHDNAEAMSSTMAQHFRLTA
EDHCMLVLPLFHVNAIMVSALAVWRSHGQLSVIGSFSASRFFDHVEKVRPTYFSAVPAIY
AMLAALPDTVRPDTSSLRFVVCGAAPVSKELLQRCHDRFGFVMVEGYGLTEATCASACNP
VDGVRKLGTVGPALPGQRIAIMSPDGELLAPGETGEVVIAGPTVMRGYLDRPDATAETVR
DGWLHTGDIGILDEDGYLRIVDRVKDMIIRGGENIYPKEIETVLTSIDDVLEAAVVGRPD
PVLGEVPVAYVVLYPDAATTAEDLLEHCRRHLMRAKVPERIDILEALPKNPVGKIDKPSL
RRTLQHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctcccgctttccctttctcccctggaacgtccccaccgaggatcgctctcgc
actgcggtccgggacgacaggttcgaactcacctacgcccagctcgacgaccgaacccgc
gctgtcgcagcgcagttcgcgcgacacggcgtcggcgcgggagacatcgtcgcgatcatg
ctgccgaaccgcgtcgaactgctcgtcgcgatgctcgcggcgtggcgtctcggtgctgcc
gcgacacccgtcaatccggcgttcacggaatcggaagcgtcctatcagatctcggactcc
ggcgctgttctcgtggtcaacgcctcggtcgacgcacccgacggaggtcgacccagcatc
gcggcggacgatctcgccggtgagggcgacggacccgaacccgtggccctgcgcggcgac
gaactgggcctggtcatctacaccagcgggtccaccggccgaccgaagggcgtgatgctc
gatcacgacaacgccgaggccatgtcgtcgacgatggcgcagcacttccgtctcaccgcc
gaagaccactgcatgctcgtcctgccgctgttccacgtcaacgcgatcatggtgagcgca
ctggcggtctggcgctcgcacggacagctcagtgtgatcggatcgttctccgcgagtcga
ttcttcgaccacgtggaaaaggtccgccccacatacttttccgctgtacccgcaatctac
gcgatgctcgccgcgctgcccgacaccgtccgccccgacacctcgtcgctgcggttcgtg
gtgtgcggcgcggctccggtctcgaaggaactgctgcagcggtgccacgaccgtttcggg
ttcgtcatggtcgagggatacggactcaccgaggcgacctgcgcatccgcctgcaatccc
gtcgacggcgtccgcaagctcggaaccgttgggccggccctacccgggcagcggatcgcg
atcatgtcgccggacggtgaactgttggcgcccggcgagacaggggaagtggtcatcgcg
ggacccaccgtcatgcgcggctacctggatcgccccgacgcgaccgccgagaccgtccgt
gacggctggctccacaccggagacatcgggatcctggacgaggacggctatctgcgcatc
gtcgaccgcgtcaaggacatgatcatccgcggcggcgagaacatctaccccaaggagata
gaaaccgtcctgacctcgatcgacgacgtcctcgaagccgcggtcgtcgggcggcccgac
ccggtcctcggtgaagttcccgtcgcctacgtggtgctgtacccggatgcggcgacgacc
gccgaggatctcctcgaacactgccgacggcacttgatgcgcgcgaaggtgcccgagcgg
atcgacatcctcgaggcactaccgaagaacccagtcggcaagatcgacaaaccctcgctc
aggcgaacgctgcaacacgcctga
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