Rhodococcus rhodochrous: 4535765_02828
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Entry
4535765_02828 CDS
T05521
Symbol
polA_2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03030
DNA replication
rrt03410
Base excision repair
rrt03420
Nucleotide excision repair
rrt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4535765_02828 (polA_2)
03410 Base excision repair
4535765_02828 (polA_2)
03420 Nucleotide excision repair
4535765_02828 (polA_2)
03440 Homologous recombination
4535765_02828 (polA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrt03032
]
4535765_02828 (polA_2)
03400 DNA repair and recombination proteins [BR:
rrt03400
]
4535765_02828 (polA_2)
Enzymes [BR:
rrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4535765_02828 (polA_2)
DNA replication proteins [BR:
rrt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
4535765_02828 (polA_2)
DNA repair and recombination proteins [BR:
rrt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
4535765_02828 (polA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4535765_02828 (polA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
LAMTOR
EutK_C
Motif
Other DBs
NCBI-ProteinID:
SNV20575
LinkDB
All DBs
Position
1:complement(3044066..3046831)
Genome browser
AA seq
921 aa
AA seq
DB search
MWPTLSSSVPRLTRVTRASTSATSTAATDDRPTLLLLDGHSLAFRAFYALPAENFKTHSG
QTTNAVYGFTSMLINLLRDEQPTHVAAAFDVSRKTFRAELFAAYKAQRSAAPDDFKGQID
LTKDVLGAMGIPVMAIEGYEADDIIATLATQAHAQGFRVLVVTGDRDALQLVNNDITVLY
PRRGVSDLTRFTPEAVEEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREYG
SLSGLVDRVDEVRGKTGDALRENLSNVLLNRQLTEMVRDVAVPYTPEQLALAPWDRDRIH
RLFDDLEFKVLRDRLFETLSSAEPEAEEGFEVRGGIVEPGALGDWLAEHAPAGRRHGLAV
VGTGTPYGGDATAIAVAGADGEGAYVSTVALTPEDENALAAWLANPAVEKAVHEAKFAIH
ALRGRGWTLAGITSDTALAAYLVRPGQRSFKLDDLSLRYLKRELRVEDAGAQQLSLLDDE
DSADAQAAESQILAARAVVDLAAALDTELGDIESVRLLTEMELPLLEVLAELEATGIAVD
STHLHDLQSEFAAQVAAAANAAYEVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTT
DADALQNLFDKTGHPFLEHLLAHREHTKMKTTVDGLIKSIADDGRIHTTFNQTVAATGRL
SSTEPNLQNIPVRTEAGRRIRDGFVVGDGFDVLLTADYSQIEMRIMAHLSADEGLIEAFR
TGEDLHTFVASRAFGLPLEEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTDEAREQM
EAYFTRFGGVRDYLYNVVEEARKVGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPI
QGTAADIIKVAMIDVQKALSEAGLRSRMLLQVHDELVLEVVEAEREQVEALVRDKMDSVI
ELSVPLEVSVGYGRSWDAAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgtggccgacgctgtcgtcctcggtccctagactgacacgcgtgacccgtgcatccact
tccgcgacgtccaccgcggccaccgacgaccgcccgaccctgctgctcctcgacggccat
tccctcgcgttccgcgcgttctacgcgctgcccgccgagaacttcaagacccacagcggg
cagaccacgaacgcggtctacgggttcacctccatgctcatcaacctgctgcgcgacgag
cagcccacgcacgtcgcggcggcattcgacgtcagtcgcaagaccttccgtgccgaactg
ttcgccgcctacaaggcccagcgcagcgccgcacccgacgacttcaaggggcagatcgac
ctcaccaaggacgtcctcggcgcgatggggatcccggtgatggcgatcgagggctacgag
gccgacgacatcatcgccacgctcgcgacacaggcgcacgcccagggcttccgggtgctc
gtcgtcacgggcgaccgcgacgcgctccagctcgtgaacaacgacatcacggtgctgtat
ccgcggcgcggcgtctccgatctgacgcggttcactcccgaggcggtggaggagaagtac
ggactcactccccagcagtatccggacttcgcggcgttgcgcggcgacccgagcgacaac
ctgcccggcatccccggcgtcggcgagaagaccgccgcgaagtggatccgcgaatacgga
agcctgagcgggctcgtcgaccgcgtcgacgaggtgcgcggcaagaccggcgacgcgctc
cgggagaacctgtccaacgtgctgctcaaccgccagctcaccgagatggtgcgcgacgtg
gccgtgccgtacacccccgaacagctcgccctcgccccgtgggaccgcgaccgcatccac
cgcctgttcgacgacctcgagttcaaggtgctgcgcgaccggctgttcgagacgctctcc
tcggccgagcccgaggccgaggagggtttcgaggtgcgcggcgggatcgtcgagccgggt
gccctcggcgactggctcgccgaacacgccccggcgggtcgacgtcacggcctcgccgtg
gtgggcaccggcaccccctacggcggcgacgcgaccgcgatcgccgtcgccggagccgac
ggtgagggcgcctacgtgagcaccgtggcgctcacccccgaggacgagaacgccctcgcc
gcatggctcgcgaaccccgccgtggagaaggccgtgcacgaggcgaagttcgccatccac
gcgctgcgcggacgcggctggacgctcgccggcatcaccagcgacaccgcgctcgccgcc
tatctggtgcggcccgggcagcgctcgttcaagctcgacgacctgtcgctgcgctacctc
aagcgtgagctgcgggtggaagacgccggcgcgcaacaactctcgctgctcgacgacgag
gactccgccgacgcgcaggcggccgagtcccagatcctcgcggcgcgcgccgtcgtcgac
ctcgccgcggccctcgacaccgaactcggggacatcgaatcggtgcgcctgctcaccgag
atggaactgcccctgctcgaggtcctcgcagaactcgaggccaccggcatcgccgtcgac
tcgacgcacctgcacgacctgcagtccgaattcgcggcccaggtcgccgccgccgcgaac
gccgcctacgaggtgatcggcaagcagatcaacctcggctcgccgaaacagctgcaggtg
gtgctgttcgacgagctcgagatgccgaagacgaagaagaccaagaccggctacaccacc
gacgccgacgccctgcagaacctgttcgacaagacgggccatcccttcctcgaacacctg
ctcgcgcaccgtgagcacaccaagatgaagaccaccgtcgacggactcatcaagtccatc
gccgacgacggtcgcatccacaccaccttcaaccagaccgtcgcggcgacgggccggctc
tcgtcgaccgagccgaacctgcagaacattccggtgcggaccgaggccggtcgccggatc
cgcgacggtttcgtggtgggcgacggattcgacgtgctgctcaccgccgactacagccag
atcgagatgcgcatcatggcgcacctgtcggccgacgaggggctcatcgaggcatttcgc
acgggcgaggacctgcacaccttcgtggcatcgcgggcgttcgggctgccgctcgaggag
gtcaccccggagttgcgtcgccgcgtcaaggcgatgtcctacggcctcgcctacggattg
agcgcctacgggctcgcccagcagctgaagatctccaccgacgaggcccgcgagcagatg
gaggcctacttcacccgcttcggcggcgtgcgcgactacctctacaacgtggtcgaggag
gcccgcaaggtcggctacacctccactctctacggtcgccgccggtatctgcccgacctc
aacagcgacaaccggcagcgccgggaggtcgccgagcgcgccgcgctcaacgcccccatc
cagggcacggccgccgacatcatcaaggtcgcgatgatcgacgtgcagaaggcactgagc
gaggccggactgcggtcgcggatgctgctgcaggtgcacgacgaactcgtgctcgaagtg
gtcgaggccgagcgcgaacaggtcgaggcgctcgtgcgcgacaagatggactccgtcatc
gagttgtcggtgccgctcgaggtctcggtcggttacggccgcagctgggacgccgcggcg
cactga
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