Rhodococcus rhodochrous: 4535765_02952
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Entry
4535765_02952 CDS
T05521
Symbol
rluD
Name
(GenBank) tRNA-pseudouridine synthase i
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rrt
Rhodococcus rhodochrous
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrt03009
]
4535765_02952 (rluD)
Enzymes [BR:
rrt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
4535765_02952 (rluD)
Ribosome biogenesis [BR:
rrt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
4535765_02952 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
SNV21005
LinkDB
All DBs
Position
1:complement(3176721..3177647)
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AA seq
308 aa
AA seq
DB search
MRETRAMPVPDGLDGMRVDAGLARLLGLSRTVVATLTEEGAVVVDGAAVGKSDRLSAGSW
LEVELPEPPRPLTIEAQPVEGMEILYADDDIVAVDKPVGVAAHASVGWTGPTVIGGLAAA
GYRISTSGAHERQGIVHRLDVGTSGVMVVATSERAYTVLKRAFKERTVEKRYHALVQGHP
DPSSGTIDAPIGRHRSSDWKFTVTADGKPSVTHYDTIEAFQAASLLDIHLETGRTHQIRV
HFSALRHPCCGDLTYGADPRLAARLGLERQWLHACTLGFSHPTRGHWVEITSKYPPDLEH
ALAVLRNA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaaacccgcgcgatgcccgtacccgacgggctcgacgggatgcgtgtcgatgca
ggcctcgcgcgcctgctcggtctgtcccggaccgtggtcgccacgctcaccgaggagggc
gccgtcgtggtcgacggcgcggccgtgggcaagtccgaccgactgtccgccggctcctgg
ctcgaggtggaactgcccgagccgccccgccccctgaccatcgaggcccagcccgtcgag
ggtatggagatcctctacgccgacgacgacatcgtcgctgtcgacaagcccgtgggtgtc
gccgcccacgcgagcgtcggctggaccggaccgaccgtgatcggtggtctcgccgccgcc
ggctaccggatctccacgtccggggcccacgagcgccagggcatcgtgcaccggctcgac
gtgggcacctccggcgtcatggtggtcgcgacgtccgaacgcgcctacaccgtgctcaag
cgcgcgttcaaggaacgcacggtcgagaagcggtaccacgcgctcgtccaggggcatccc
gacccgagcagcggcacaatcgacgcaccgatcggccgtcatcgcagcagcgactggaag
ttcacggtcaccgccgacggcaagcccagcgtgacgcactacgacacgatcgaggcgttc
caggcggcgagcctgctcgacatccacctcgagaccgggcgcacccatcagatccgggtg
cacttctcggcgctgcgtcacccctgttgcggcgacctcacctacggagccgacccgcgt
ctcgcggcgcgtctcggtctcgaacggcagtggttgcacgcgtgcaccctcgggttctcg
caccccacgcgcggacactgggtcgagatcaccagcaagtacccgccggatctcgaacac
gcgctcgccgtgttgcgcaacgcctga
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