Rhodococcus rhodochrous: 4535765_02969
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Entry
4535765_02969 CDS
T05521
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00470
D-Amino acid metabolism
rrt00550
Peptidoglycan biosynthesis
rrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
4535765_02969 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
4535765_02969 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrt01011
]
4535765_02969 (murD)
Enzymes [BR:
rrt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
4535765_02969 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rrt01011
]
Precursor biosynthesis
Amino acid ligase
4535765_02969 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
TrkA_N
NAD_binding_7
Shikimate_DH
XdhC_C
ADH_zinc_N
Pyr_redox
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
SNV21051
LinkDB
All DBs
Position
1:complement(3195406..3196896)
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AA seq
496 aa
AA seq
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MNDELERLRGRAVLVAGAGVSGRATIEPLTDLGAHVTVTDRNERALAECAALGARTVDLD
SLVDDPAALREFALVVTSPGFPPDAPLLSRAAGAAIPIWGDIELSWRIDRAEVYGPARRW
LVVTGTNGKTTTTMMLQAILEAAGLGSVACGNIGLSVLDALRRDEPRADVLAVELSSFQL
HWAPSVRPEAGVVLNIAEDHLDWHGGIENYIEAKLGALTGAVGVIGLDDPIAGGLGDRSR
AVVTVGFTLGYPQEGELGISGELLVDRAFADSAVLARVDDVTPPGPAGLSDALAAAALAR
AIDVPASAVHDGLRRHRVGPHRAAPVGQVDGVEYIDDSKATNPHAARSSLLARDRVVWIA
GGLLKGARVDDLVAEVAPRLSGAVLLGRDAGEIADALARHAPQVPVVVVDTGDDEAMTDA
TSETDTASVRRVAAPGADGPAAMRVAVREAAALASPGETVLLAPAAASLDMFADYAERGR
SFASAVEELRGGGTQP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgaactcgaacggctcagaggacgggcggtgctcgtcgccggggcaggggtc
tccggccgcgcgacgatcgaacccctcaccgatctcggcgcccacgtcaccgtcaccgac
cgcaacgagcgcgcactggccgagtgcgcggcgctcggcgcccggacggtcgacctcgac
agcctcgtcgacgaccccgctgcgctgcgcgagttcgccctggtggtcacgagtcccgga
ttcccgcccgacgccccgctgctctcgcgcgcggccggcgcggcgatccccatctggggc
gacatcgaactgtcctggcgcatcgaccgcgccgaggtctacggaccggcccgtcggtgg
ctggtcgtcaccgggacgaacggcaagaccaccacgaccatgatgctgcaagcgatcctc
gaggccgccggtctcggcagcgtcgcgtgcggcaacatcggtctttccgtgctcgacgcc
ctgcgccgcgacgaaccgcgggccgacgtcctcgccgtggagttgtcgtccttccagctg
cactgggcgccctcggttcggcccgaggccggtgtcgtgctcaacatcgccgaggaccat
ctcgactggcacggcggcatcgagaactacatcgaggccaaactcggtgccctcaccgga
gccgtcggggtcatcggtctcgacgacccgatcgccggtggtctcggcgaccggtcccgt
gccgtggtcaccgtgggcttcaccctgggctatccgcaggaaggcgaactcgggatcagt
ggcgaactgctcgtggatcgggcgttcgccgattccgccgtgctcgcccgggtggacgac
gtgacgccgcccggccccgccggactgtccgatgcactcgcggccgccgccctcgcccgg
gccatcgacgtgcccgcctcggcggtgcacgacggcctgcgacggcaccgcgtgggcccg
caccgcgccgcgcccgtggggcaggtcgacggcgtcgagtacatcgacgactcgaaggcg
accaatccgcacgcggcccgcagttcgctgctcgcccgcgaccgcgtggtgtggatcgcc
ggtggtctgctcaagggcgcccgggtggacgacctggtcgccgaggtggcaccgcgactg
tccggagccgtgctgctcggccgcgacgccggcgaaatcgccgacgcgctggcgcgacac
gccccgcaggtcccggtcgtcgtcgtggacacgggcgacgatgaagcgatgaccgatgcg
acgagcgagaccgacaccgcctcggtgaggagggtcgcggcgccgggcgccgacggcccc
gccgctatgcgcgtggcggtccgggaagcggccgctctcgcctcgccgggggagacggtg
ctgctcgcgccggccgcggcatcgctcgacatgttcgccgattacgccgaacgcggcagg
agcttcgcgtccgcggtcgaggaactccgcgggggcgggacgcaaccgtga
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