Rhodococcus rhodochrous: 4535765_03475
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Entry
4535765_03475 CDS
T05521
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4535765_03475 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrt03019
]
4535765_03475 (groEL)
03110 Chaperones and folding catalysts [BR:
rrt03110
]
4535765_03475 (groEL)
03029 Mitochondrial biogenesis [BR:
rrt03029
]
4535765_03475 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrt04147
]
4535765_03475 (groEL)
Enzymes [BR:
rrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
4535765_03475 (groEL)
Messenger RNA biogenesis [BR:
rrt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
4535765_03475 (groEL)
Chaperones and folding catalysts [BR:
rrt03110
]
Heat shock proteins
HSP60 / Chaperonin
4535765_03475 (groEL)
Mitochondrial biogenesis [BR:
rrt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
4535765_03475 (groEL)
Exosome [BR:
rrt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4535765_03475 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
4535765_03475 (groEL)
Exosomal proteins of breast cancer cells
4535765_03475 (groEL)
Exosomal proteins of colorectal cancer cells
4535765_03475 (groEL)
Exosomal proteins of bladder cancer cells
4535765_03475 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
SNV22601
LinkDB
All DBs
Position
1:complement(3729238..3730848)
Genome browser
AA seq
536 aa
AA seq
DB search
MSKQIEFNETARRALERGVDQLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKAGLKNVAAGANPIALGAGIA
QGADKVSEALLAAATPVEGKTAIAQVATVSSRDEEIGEMVGEALTRVGENGVVTVEESST
LSTELVVTEGVQFDKGFLSPYFITDIDAQEAVLEDALVLLYREKISSLPDFLPLLEKIAE
SGKPVLIIAEDIEGEPLSTLVVNAIRKTLKAVAVKAPYFGDRRKAFLEDLAVVTAGTVIN
SDLGLSLKEAGLDLLGSARRVVVTKDSTTIVDGAGTAEDIEARAAQLRREIEATESDWDR
EKLEERLAKLAGGVAVIRVGAATETDLKERKFRVEDAVNAAKAAIEEGIVPGGGSALVQA
ARSLEELQASLSGDAATGVAALRTALTAPLYWIATNAGIDGAVVVSKVAESGQGFNAATL
SYGDLVAEGVVDPVKVTRSAVVNAASVARMVLTTESAVVDKPEEEAEAGHGHGHAH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaatcgagttcaacgagaccgcgcggcgggctctcgagcgcggtgtcgac
cagctggccgacgccgtcaaggtgacgctcggcccgcgtggccggcacgtcgtgctcgcc
aaggccttcggtggtcccaccgtcacgaacgacggtgtgagcatcgcccgtgagatcgag
ctggaggatccgttcgagaacctcggcgcccagctcgtcaagagtgtcgcgaccaagacc
aacgacgtcgcgggtgacggcaccaccaccgcgaccgttctcgcccaggcgctcgtcaag
gccggcctgaagaacgttgccgcaggcgccaatccgatcgcgctcggtgccggtatcgcc
cagggtgccgacaaggtgagcgaggctctgctcgctgccgcaactcccgtcgagggcaag
accgccatcgcgcaggtcgccaccgtgtcctcgcgcgacgaggagatcggtgagatggtc
ggcgaggcgctgacccgagtcggggagaacggtgtcgtcaccgtcgaggaatcctccacg
ctgagcaccgaactggtcgtcaccgagggcgtgcagttcgacaagggcttcctgtcgccc
tacttcatcacggacatcgacgcgcaggaagccgtcctcgaggacgcgctcgtcctgctg
taccgcgagaagatcagctcgcttcccgacttcctcccgctcctcgagaagatcgcagag
tccggcaagccggtcctgatcatcgccgaggacatcgagggcgagccgctgtcgaccctg
gtggtcaacgcgatccgcaagaccctcaaggccgttgccgtcaaggctccgtacttcggt
gatcgccggaaggccttcctcgaagacctcgccgtcgtcaccgcgggtacggtcatcaac
tccgatctgggtctgtccctcaaggaggccggactcgacctgctcggctcggcccgccgc
gtcgtcgtcacgaaggacagcaccacgatcgtcgacggtgccggtaccgccgaggacatc
gaggcgcgcgccgctcagctgcgtcgtgagatcgaggccaccgagtccgactgggaccgc
gagaagctcgaagagcgcctcgcgaagctcgccggtggcgtcgccgtcatccgtgtgggt
gcggcgaccgagacggacctcaaggagcgcaagttccgcgtcgaggacgcagtcaacgcc
gcgaaggcggccatcgaggagggcatcgtccccggtggcgggtcggctctcgtgcaggcc
gcacgctcgctcgaggagctccaggcgtccctttccggcgacgccgccacgggcgtcgcc
gcgctgcgcaccgcgctcaccgcgccgctgtactggatcgccacgaacgccggcatcgac
ggtgcggtggtcgtgagcaaggttgccgagagcggtcagggcttcaacgccgcgaccctc
tcctacggcgacctcgtcgccgagggcgtcgtcgacccggtgaaggtgacgcgctccgcc
gtcgtcaacgccgcgtcggtcgcacgcatggtgctcaccaccgagagcgccgtcgtcgac
aagccggaggaagaggccgaggccgggcacggccacggtcacgcgcactga
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