Rhodococcus rhodochrous: 4535765_03762
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Entry
4535765_03762 CDS
T05521
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rrt
Rhodococcus rhodochrous
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrt03021
]
4535765_03762 (sigB)
Transcription machinery [BR:
rrt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
4535765_03762 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR
HTH_3
HTH_Crp_2
MarR_2
HTH_24
DUF7343
HTH_31
Sigma70_ECF
HTH_23
HTH_20
HTH_ParB
LacI
HTH_Tnp_4
HTH_AraC
HTH_IclR
KORA
Motif
Other DBs
NCBI-ProteinID:
SNV23583
LinkDB
All DBs
Position
1:4048799..4049581
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AA seq
260 aa
AA seq
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MTRNTGRSSDEYADVTETLRTLLALEEGDPGRIRIRDAVVERCLPLAEHIARRFDGRGEA
FEDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRRMKELH
LSLSKATSELSQQLGRAPTASELAEVLGIDQEEVLQGLVAGNAYQTVSVDRSSPSGDDRL
TLADTLGDYDAALDEVENHEALRPLLEALPARERTVVLLRFFGNMTQTQIAERVGVSQMH
VSRLLTKTLAQLREQLGDNF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcaacacgggtaggtcgagcgacgagtacgccgacgtcaccgaaacgttgaga
acactcctcgcactcgaggagggcgaccccggtcgcatccgcatccgcgacgcagtggtc
gagcggtgcctgccgctcgccgagcacatcgcccggcgcttcgacggccgtggtgaggcc
ttcgaggatctgctgcaggtcgcgcgcctgggcctggtcaacgcggtcgaccgtttcgac
cccgaacgcggttcggatttcgtctccttcgcggtccccacgatcatgggcgaggtgcgc
aggcacttccgtgacgccggctgggccgttcgtgtgccgaggcgcatgaaggaactgcac
ctgtccctgagcaaggccacctccgagctctcccagcagctcggacgtgcacccaccgcc
tccgagctcgccgaggtactcggcatcgatcaggaggaggtgctgcagggtctcgtggcc
ggcaacgcctaccagacggtgtcggtcgaccggtcgtccccgtccggcgacgaccggctc
actctcgccgacacgctcggcgactacgacgccgcgctcgacgaggtcgagaaccacgag
gcgctgcgtccgttgctcgaggcccttccggcccgcgaacgcacggtcgtgctgctgcgc
ttcttcggcaacatgacgcagacgcagatcgccgagcgcgtgggtgtctcgcagatgcac
gtgtcgcgtctgctcacgaagaccctcgcgcagctccgcgagcagctcggcgacaacttc
tga
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