Rhodococcus rhodochrous: 4535765_04792
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Entry
4535765_04792 CDS
T05521
Symbol
lysA_2
Name
(GenBank) diaminopimelate decarboxylase lysa
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00300
Lysine biosynthesis
rrt00470
D-Amino acid metabolism
rrt01100
Metabolic pathways
rrt01110
Biosynthesis of secondary metabolites
rrt01120
Microbial metabolism in diverse environments
rrt01230
Biosynthesis of amino acids
Module
rrt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
4535765_04792 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
4535765_04792 (lysA_2)
Enzymes [BR:
rrt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
4535765_04792 (lysA_2)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF2259
Motif
Other DBs
NCBI-ProteinID:
SNV28436
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All DBs
Position
1:5150642..5151820
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AA seq
392 aa
AA seq
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MRNEIITPTDREAQLLVHRAGRTPVYTYSRAALRDAVERVRAASVLGADIYYSLKANPYA
GVVNALSTLVDGFDVCSLAEMETALNAGMPPDKVLFTGPAKSREEAAAALAAQVAVTVES
PRQARLFAETAVELGVNGRTVVRLNTPYPGRTPAAAPYPNQFGVSQDDVAEVMDILRASS
LSVAGLQLFWGSQYSDADVILAARKAMTEQARACADQFGLELDLVSIGGGIAMPWCDADP
AVDWAGLKAANLDPGLPNGNDPLPLVCEYGRSIVGPAGSLLTTVLDTKSIGDRRYVLVDA
GMNHVLIASRLVAGAGRGEPRVRVVGAQERAITSRACVTGPLCSQLDMLAEDIQLPEVET
GDLLLFSGLGAYGPTFSPSGFLSRDKVREIIF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaatgaaatcatcacgcccaccgatcgcgaggcacagctcctcgtgcaccgggcc
ggccggacaccggtatacacctacagccgggcagccctgcgcgatgccgtcgagcgggtc
cgcgcggcatcggttctgggggcggacatctactactcgctcaaggctaatccatatgcc
ggggtcgtgaacgcgctatcgacgctggttgacggtttcgacgtctgttcactggcggag
atggagactgcactgaacgccggaatgccgccggataaggtgctgttcaccggtcccgca
aagtcgcgcgaggaggcagctgcggcactagcagcacaggtcgcggtgaccgtcgaatca
ccaaggcaggcccgcctgttcgccgagacagcggttgaactcggtgtgaatgggcgcacc
gtcgtccgactgaacacgccctacccgggccggactccggccgccgccccgtacccgaac
cagttcggggtatcgcaggatgacgtcgccgaagtaatggatatcctgcgtgcttcgtca
ctgtcggttgccggtctgcagcttttctggggctcgcagtactctgatgccgacgtcatc
ctggccgcgcggaaagctatgacggaacaagctagagcgtgcgcagaccagttcggtctg
gagcttgaccttgtgtcgatcggtggcggcatcgcgatgccgtggtgtgacgccgaccct
gctgtcgactgggcgggactcaaggcggccaacctcgatcccggcctgccgaacggcaac
gacccgctacccctcgtatgtgagtacggtagatcgatcgtcggtccggctggcagcctg
ctgacaaccgtgctcgacaccaagagcatcggtgaccgcaggtacgtcctggtcgacgcc
gggatgaaccacgtactcatcgcaagccgactggtggccggagctggccggggcgagccc
cgggtccgggttgtgggtgcacaggaacgcgcaattactagccgtgcctgtgtcacgggt
cccctgtgctcgcagctcgacatgctcgctgaagacattcaactgcccgaagtggaaacc
ggtgacctactcctgttctcgggtctgggcgcctatgggccgacgttcagccccagcggc
ttcctgagccgcgacaaagtaagagagatcatcttctga
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