Rhodospirillum rubrum ATCC 11170: Rru_A0054
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Entry
Rru_A0054 CDS
T00310
Name
(GenBank) 1-Deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00730
Thiamine metabolism
rru00900
Terpenoid backbone biosynthesis
rru01100
Metabolic pathways
rru01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rru_A0054
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Rru_A0054
Enzymes [BR:
rru01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
Rru_A0054
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
Motif
Other DBs
NCBI-ProteinID:
ABC20859
UniProt:
Q2RYD6
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Position
58117..60054
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AA seq
645 aa
AA seq
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MTSRPITPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTV
ALHHVFDTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAG
HSSTSISAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDN
DMSIAPPVGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGG
GTLFEELGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDK
YHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLAT
AYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFA
IDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYP
RGEGVGVEIPEDPQPLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVAD
ARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPD
RFFEHDAPEVQCAKAGIDAQAITTAVLDALKLETSATIDAGALKA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcgagaccgataacgccgcttttggacacgatccgcggtccttcggacacacgg
ggtctttcggtggcgcagctggagcagctggcgcgcgaagtgcgggcggaaatgatcgat
gcggtctcggtgaccggcggtcatctgggctcggggcttggggtggtcgagctgacggtg
gccctccatcacgtgttcgacacccccgacgaccgcatcatctgggatgtcggccatcag
tgctatccccacaagatcctgaccgggcggcgcgatcgcatccgcaccctgcgccagggc
ggcgggctgtcgggcttcaccctgcgcgaggaaagcccctatgaccccttcggcgccggg
cattcctcgacctcgatctcggcgggtctgggcatggccatcggctcggccctggccggc
gacgcccgcgacgtggtggcggtgatcggcgacggctcgatgagcgcgggcatggcctat
gaggcgatgaacaatgccggggcggccaaatcgcggctgatcgtcatcctcaacgacaac
gacatgtcgatcgccccgccggtgggggcgatgagcgcctatctgtcgcggctgctcagt
tcgaaaagctggctgtcgatccgcaccctggccaaggagatcgtcgcccgcctgcccgac
gccctggagcgcacggccaagcgggccgaggaatacgcccgcggcatggtgacgggcggc
ggcacgctgttcgaggagctgggcttttattacgtcgggccgatcgacggccatcgcatg
gaccatctggtgccggtgctgcgcaacgtgcgcgaggccgggcgcgatggtccggtgctg
atccacgtggtgacgcaaaagggcaagggctatgccccggccgagaacgcgcccgacaaa
taccacggcgtgtcgcgcttcaacgtggtgaccggggttcaggaaaaggccaagccgcag
gcgccgtcctatacggcggtgtttggcaagcagctggtggcggcggcggccaaggaccat
cggatcgtcggggtgacggcggcgatgcccggcggcaccggccttgacaagctggccacg
gcctatccgcagcgctgcttcgatgtcggcatcgccgaacagcacgccgtgaccttcgcc
gccggtctggcctgcgaggggctgaagcccttcgtcgccctctattccagctttttgcag
cgcggctatgatcaggtggtccacgacgtggtcttgcagaagctgccggtgcgcttcgcc
atcgaccgcgccgggttcgtcggcgccgacggggcgacccatggcggcgtcttcgacatg
gccttcctcggctgcctgcccaatctggtggtgatgtgcgccgccgacgaggccgagctg
gcgcgcatggtggtgacggcggccggccatgacagcggcccgatcgccctgcgctatccg
cgcggcgagggcgtgggggtggagatccccgaggatccccaacctttggcgatcggcaag
ggccgcatcgtgcgcgagggcaagggcgtggccctgctatcgatcggcacccggctgcag
tcgtgcctggaggcttgcgagatcctggcggcgcgcggcctgacgccgacggtggccgac
gcccgcttcctcaagcccttcgacgaggaactggtggccgatctcgccgcccgccacgag
gtgctgatcgtcgtcgaggaaggcgcgatcggcggcttcggcgcccatgtcgccacttgg
ctgaccaaccagggcctgctcgacggcggcctcaagctgcgcgccctgcatatccccgac
cgcttcttcgagcacgacgcgcccgaggtccaatgcgccaaggccggcatcgacgcccag
gccatcaccaccgccgtcctcgacgccctcaagcttgaaaccagcgccaccatcgacgcc
ggcgccctgaaggcgtaa
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