Rhodospirillum rubrum ATCC 11170: Rru_A0505
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Entry
Rru_A0505 CDS
T00310
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00500
Starch and sucrose metabolism
rru01100
Metabolic pathways
rru01110
Biosynthesis of secondary metabolites
Module
rru_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rru_A0505
Enzymes [BR:
rru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Rru_A0505
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Isoamylase_C
pulA_all-beta
Malt_amylase_C
ISOA1-3_C
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
ABC21309
UniProt:
Q2RX36
LinkDB
All DBs
Position
595288..597432
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AA seq
714 aa
AA seq
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MSAPSTPLVWPGQPFPLGATWDGSGTNFALFSAHAEKVELCLFDRAGRKETARIVLPEYT
DEIWHGYLPDIRPGQMYGYRVYGPYDPNAGHRFNANKLLIDPYAKSLKGEILWHDALFAY
KLGHPDGDLTFDRRDSARHMPKCEVVDPAFTWGRSMEPHPWHETVIYEMHPRGFTMLHPG
VPEELRGTFDGLAHRRVTDYLTDLGVTAIELLPVHAYVQDRHLIDRGLTNYWGYNSIGFL
APHATYLGHGRTASAFKAFVQKMHDAGLEVILDVVYNHTAEGNHLGPTLSFKGIDNRSYY
YLMGEDLRHYNNFTGTGNALELRHPRVLGMVMDSLRYWATAMGVDGFRFDLATTLARVEG
PFTEHAGFLDAVAQDPVLSHVKLIAEPWDTGLGGYQVGAFPPGWAEWNDQYRNTIRKFWK
GDDGLLPTMAGRFSASSDVFNRRGRRPWASVNFITAHDGFTLADLVSYNGKHNEANGEDN
RDGSDDNNSWNCGAEGPTDDEEINTLRRRQMRNMLATLLLSQGTPMLLAGDEFANSQNGN
NNAYCQDNALSWLDWDGIDEKARSQIAFVTSLLRLRREHVVFHRTRFFTGSVIPGTEVKD
VVWLRPDGEEMTEADWGNSVSQALAIRLSGEAGLTHLDRRGRQQTDDTFLLVLNASHTEV
VFTLPEGGRWETVIDTMDEDGQSSLPKADGGTIRALPGRSLQVLRCRAAHGRSA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgtcgacgcccctggtttggccgggtcagccctttcccctgggtgcgacc
tgggatggatcggggaccaacttcgccttgttctcggcccatgccgaaaaggtcgagctc
tgtctgttcgaccgggcgggccgcaaggaaaccgcccgcatcgttctgcccgaatatacc
gacgagatttggcacggttatctgcccgacatccgccccggccagatgtacggctatcgg
gtttatggaccctatgatcccaatgccggccaccgcttcaacgccaataagctgctgatc
gacccctacgccaaatcgctcaagggcgagatcctgtggcatgacgcgctgttcgcctac
aagctcggccatcccgatggcgatctgaccttcgatcgccgcgactcggcccgccatatg
cccaaatgcgaggtggtcgatccggcctttacctgggggcggtcgatggagccgcatccc
tggcatgagacggtgatctacgaaatgcatccgcgcggcttcaccatgctccacccgggg
gtgcccgaagagctgcgcggcaccttcgacggcctcgcccaccgtcgcgtcaccgattac
ctgaccgatctgggggtgaccgccatcgaactattgcccgtccatgcctatgtgcaagat
cgccacctgatcgatcgcgggctgaccaattactggggctataattcgatcggtttcctc
gccccccatgccacctatcttggccatggccgcaccgcctccgccttcaaggccttcgtc
cagaagatgcacgacgccgggctcgaggtgatccttgatgtggtctacaaccacaccgcc
gagggcaatcatctggggccgaccctgtcgttcaagggcatcgacaaccgctcgtattat
tatctgatgggcgaagacctccgccattacaacaacttcaccggcaccggcaacgccttg
gaactgcgccacccgcgcgttctgggcatggtgatggactcgctgcgctattgggcgacg
gcgatgggggtcgatggttttcgcttcgatctggcgaccaccctggcccgggtcgaaggg
cccttcaccgaacacgccggttttctggacgccgtggcccaggaccccgtgctcagccac
gtcaagctgatcgccgagccctgggatacgggcctgggcggctatcaggtcggcgccttt
ccgccggggtgggcggaatggaacgaccagtatcgcaataccattcgcaagttttggaag
ggcgatgacggcctgttgccgacgatggccgggcggttttcggcctcctcggatgtcttc
aaccgccggggccgtcggccttgggccagcgtcaatttcatcaccgcccacgacggcttc
accctggccgatctggtttcctacaacggcaagcacaacgaggccaacggcgaggacaat
cgcgacggctcggacgacaacaactcgtggaactgcggcgccgaggggccgaccgacgac
gaggagatcaataccctgcgccgccgccagatgcgcaacatgctggccacccttttgctc
tcccagggcacgccgatgctgctggccggcgacgaattcgccaatagccagaatggcaac
aacaacgcctattgccaggacaacgccctaagctggctggactgggacggcatcgacgaa
aaggcgcgctcgcagatcgccttcgtgaccagcctgctgcgcctgcgccgcgaacatgtg
gtcttccaccgcacccgcttctttaccggctcggtgattccgggaaccgaggtcaaggat
gtcgtctggttgcgcccggacggcgaggagatgaccgaggccgattggggcaattcggtc
agtcaggccctggccatccgtctttcgggcgaagccggcctgacccacctggatcgccgg
ggccgtcagcaaaccgacgataccttcctgctggtgctcaacgccagccacaccgaggtc
gtcttcaccctgcccgaaggcggacgttgggaaaccgttatcgacaccatggacgaggat
ggccagtcgagtctgcccaaagcggatggcgggaccatccgcgccctgcccgggcgcagc
cttcaggtgctgcgctgccgcgccgcccatgggagatcggcatga
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