Rhodospirillum rubrum ATCC 11170: Rru_A0587
Help
Entry
Rru_A0587 CDS
T00310
Name
(GenBank) Chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rru_A0587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rru03019
]
Rru_A0587
03110 Chaperones and folding catalysts [BR:
rru03110
]
Rru_A0587
03029 Mitochondrial biogenesis [BR:
rru03029
]
Rru_A0587
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rru04147
]
Rru_A0587
Enzymes [BR:
rru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rru_A0587
Messenger RNA biogenesis [BR:
rru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rru_A0587
Chaperones and folding catalysts [BR:
rru03110
]
Heat shock proteins
HSP60 / Chaperonin
Rru_A0587
Mitochondrial biogenesis [BR:
rru03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rru_A0587
Exosome [BR:
rru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rru_A0587
Exosomal proteins of other body fluids (saliva and urine)
Rru_A0587
Exosomal proteins of breast cancer cells
Rru_A0587
Exosomal proteins of colorectal cancer cells
Rru_A0587
Exosomal proteins of bladder cancer cells
Rru_A0587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABC21391
UniProt:
Q2RWV4
LinkDB
All DBs
Position
696742..698388
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFSTDARDRLLRGVDILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKSADVAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGI
DLAVLAVVEDVKKRSKKIKTSAEVAQVGTISANGDEEVGKIIATAMEKVGNEGVITVEEA
KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSSDY
DREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALL
HAIRSLDSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYN
AQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGM
GGMGGMGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgttaaattctccaccgatgcccgtgaccgtttgctgcgcggcgtc
gacatcctggccaatgcggtcaaggtgacgcttggccccaagggtcgcaatgtcgtgctc
gacaagagctacggcgccccgcgcatcaccaaggacggcgtctccgtcgccaaggaaatc
gaacttaaggacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
tccgctgacgtcgccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtc
cgcgagggcgtgaagtcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gatctcgccgttctcgccgtcgtcgaggacgtcaagaagcgctcgaagaagatcaagacc
tcggccgaagtcgcccaggtcggcaccatctcggccaatggcgacgaggaagtcggcaag
atcatcgccacggcgatggaaaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagggtctggacaccgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgagaagatggtcgccgatctcgagaacccctacatc
cttcttcacgagaagaagctgtcgggtcttcaggctctgctgccggtgctcgaggccgtc
gttcagtcgtcgcgcccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcc
accctggtcgtcaacaagctgcgtggtggcctgaaggtcgccgccgtcaaggccccgggc
tttggcgatcgtcgcaaggcgatgctcgaggacatcgccatcctgaccggtggtcaggtg
atcagcgaagacctgggtatcaagcttgagaacgtcaccatcgacatgcttggcaccgcc
aagaaggtgacgatcaccaaggaagagaccaccctggtcgacggcgccggcgacaagaag
gacatcgaggcccgttgctcgcagatccgcgccaacatcgaagacaccagcagcgattac
gatcgtgagaagctgcaggagcgtctggcgaagctcgccggcggtgtcgcggtgatcaag
gtcggcggtgccaccgagaccgaagtgaaggaaaagaaggaccgcgtggacgacgcgatg
cacgccacccgtgccgccgtcgaagagggtgtcgtcgccggtggcggtgtcgctcttctg
cacgccatccgctcgctcgactccgtgaagggtgccaaccccgatcagaacgtcggtatc
gagatcgttcgccgcgccctgcaggctccggtgcgtcagatcgccgagaacgccggcgtt
gacggcgccgtggtcgccggcaagctgctcgagaacagcgacaccgatttcggctacaac
gcccagaccggcatctacgagaacctggtcacggccggcgtgatcgatccgaccaaggtg
gtccgcgctgcccttcagggcgccgcctccatcgccggtctgctgatcaccaccgaagcg
atggtcgccgagatccccgagaagaaggacgccatgccgtcgcccgatatgggtggcatg
ggtggcatgggcggcatgggcttctaa
DBGET
integrated database retrieval system