KEGG   Rhodospirillum rubrum ATCC 11170: Rru_A0587
Entry
Rru_A0587         CDS       T00310                                 
Name
(GenBank) Chaperonin Cpn60/TCP-1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rru  Rhodospirillum rubrum ATCC 11170
Pathway
rru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rru_A0587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rru03019]
    Rru_A0587
   03110 Chaperones and folding catalysts [BR:rru03110]
    Rru_A0587
   03029 Mitochondrial biogenesis [BR:rru03029]
    Rru_A0587
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rru04147]
    Rru_A0587
Enzymes [BR:rru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Rru_A0587
Messenger RNA biogenesis [BR:rru03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Rru_A0587
Chaperones and folding catalysts [BR:rru03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Rru_A0587
Mitochondrial biogenesis [BR:rru03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Rru_A0587
Exosome [BR:rru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Rru_A0587
  Exosomal proteins of other body fluids (saliva and urine)
   Rru_A0587
  Exosomal proteins of breast cancer cells
   Rru_A0587
  Exosomal proteins of colorectal cancer cells
   Rru_A0587
  Exosomal proteins of bladder cancer cells
   Rru_A0587
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ABC21391
UniProt: Q2RWV4
LinkDB
Position
696742..698388
AA seq 548 aa
MAAKDVKFSTDARDRLLRGVDILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKSADVAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGI
DLAVLAVVEDVKKRSKKIKTSAEVAQVGTISANGDEEVGKIIATAMEKVGNEGVITVEEA
KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSSDY
DREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALL
HAIRSLDSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYN
AQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGM
GGMGGMGF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggctgccaaggacgttaaattctccaccgatgcccgtgaccgtttgctgcgcggcgtc
gacatcctggccaatgcggtcaaggtgacgcttggccccaagggtcgcaatgtcgtgctc
gacaagagctacggcgccccgcgcatcaccaaggacggcgtctccgtcgccaaggaaatc
gaacttaaggacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
tccgctgacgtcgccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtc
cgcgagggcgtgaagtcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gatctcgccgttctcgccgtcgtcgaggacgtcaagaagcgctcgaagaagatcaagacc
tcggccgaagtcgcccaggtcggcaccatctcggccaatggcgacgaggaagtcggcaag
atcatcgccacggcgatggaaaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagggtctggacaccgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgagaagatggtcgccgatctcgagaacccctacatc
cttcttcacgagaagaagctgtcgggtcttcaggctctgctgccggtgctcgaggccgtc
gttcagtcgtcgcgcccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcc
accctggtcgtcaacaagctgcgtggtggcctgaaggtcgccgccgtcaaggccccgggc
tttggcgatcgtcgcaaggcgatgctcgaggacatcgccatcctgaccggtggtcaggtg
atcagcgaagacctgggtatcaagcttgagaacgtcaccatcgacatgcttggcaccgcc
aagaaggtgacgatcaccaaggaagagaccaccctggtcgacggcgccggcgacaagaag
gacatcgaggcccgttgctcgcagatccgcgccaacatcgaagacaccagcagcgattac
gatcgtgagaagctgcaggagcgtctggcgaagctcgccggcggtgtcgcggtgatcaag
gtcggcggtgccaccgagaccgaagtgaaggaaaagaaggaccgcgtggacgacgcgatg
cacgccacccgtgccgccgtcgaagagggtgtcgtcgccggtggcggtgtcgctcttctg
cacgccatccgctcgctcgactccgtgaagggtgccaaccccgatcagaacgtcggtatc
gagatcgttcgccgcgccctgcaggctccggtgcgtcagatcgccgagaacgccggcgtt
gacggcgccgtggtcgccggcaagctgctcgagaacagcgacaccgatttcggctacaac
gcccagaccggcatctacgagaacctggtcacggccggcgtgatcgatccgaccaaggtg
gtccgcgctgcccttcagggcgccgcctccatcgccggtctgctgatcaccaccgaagcg
atggtcgccgagatccccgagaagaaggacgccatgccgtcgcccgatatgggtggcatg
ggtggcatgggcggcatgggcttctaa

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