Rhodospirillum rubrum ATCC 11170: Rru_A0932
Help
Entry
Rru_A0932 CDS
T00310
Name
(GenBank) Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rru
Rhodospirillum rubrum ATCC 11170
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rru03000
]
Rru_A0932
Transcription factors [BR:
rru03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rru_A0932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
HTH_30
HTH_23
HTH_28
HTH_17
HTH_20
Xre-like-HTH
HTH_29
HTH_Tnp_1
AAA_2
GAF_2
HTH_31
HTH_psq
HTH_1
HTH_3
HTH_7
Rv3660c_N
RsmI_C
HTH_IclR
HTH_22
Phage_NinH
HTH_Tnp_ISL3
AAA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ABC21733
UniProt:
Q2RVW2
LinkDB
All DBs
Position
1109040..1111001
Genome browser
AA seq
653 aa
AA seq
DB search
MNIASTQPGTALRRARHLLEGGSLPPAGLIAPTVAHSWERSLRAGLLPFSPPAVADHLAA
RHLAQAVERRRELLMRARPVMDYLHAQTKGSDSVVILADDNGVLIEALGDAAFVERAERV
ALKPGASWHERHRGTNAIGTALVEAQPVAVHGGEHFFEHNRFLTCAAAPIAGPDGRVLGV
LDISGPQRGRHPHTFGLVRAATHMIENKLFEARHEGEYRIRFHPQADGIGTLAEGMVALS
EEGLVIGANRAALAFLAITPSDIGKALIEALLPLRMADILDHGHRHPGTTLGLACPGGGR
FSLRVEPGWRAVVRPAAMPAPDRVQDALADLDTGDPTMAGAIERVRKILGKPIPLLLQGE
SGVGKEVFATALHATGPRRGRPFVAVNCAALPEHLIEAELFGYAPGAFTGARREGSAGRI
REAEGGTLFLDEIGDMPLALQCRLLRVLQDRQVVPLGGGKAVSVDFALIAASHRPLKAEA
EAGRFRADLYYRLNGLTLCLPPLRARRDFAALVARMIETMEPGAGIGLDPDVADALAGHG
WPGNLRQLANVLRFACALRDPGEIRLGWHHLPEDLIEELRCPSGVDTDAGAGPATLRAAS
DSLIERMVAASGGNLSEAARRLGISRNTLYRRMNGWAKPPAPLPMGPARPCMK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgccagcacccaaccggggaccgcgctgcggcgcgcccgtcacctgcttgaa
ggcggcagtcttccgccggccggactgattgccccgaccgtcgcccattcctgggagcgc
agcctgcgggccgggctgcttcccttcagcccgcccgccgtggccgatcatctggccgcc
cgccatctcgcccaggcggtggagcgccggcgcgaactgctgatgcgcgcccgcccggtc
atggattatctgcacgcccagaccaaggggtccgacagcgtcgtcatcctcgccgatgac
aacggcgtgctgatcgaggccctgggcgacgccgcctttgtcgaacgcgccgaacgggtg
gccctcaagcccggggcctcgtggcatgaacgccaccgtggcaccaacgccatcggcacc
gccctggtcgaggcccagccggtggcggtgcatggcggcgagcatttcttcgagcacaat
cgcttcctgacctgcgccgcggcgccgatcgccggtcccgatggccgggtgctgggcgtg
cttgatatctccggcccgcagcgcggccgccatccccacaccttcgggttggtgcgcgcc
gccacccatatgatcgagaacaagctgttcgaggcccgccacgagggggagtatcggatc
cgcttccatccccaggccgatggcatcggcaccctggccgagggcatggtcgccttgtcg
gaggaagggctggtcatcggcgccaatcgggcggccctggcttttctcgccatcacgcca
agcgacatcggcaaggcgctgatcgaggcgctgttgcccttgcgcatggccgatatcctg
gatcatggccaccgccaccccggcaccaccctgggcttggcctgtccggggggagggcgg
ttctccctgcgcgtcgagcccggctggcgggcggtggtgcggccggcggcgatgcccgcg
cccgaccgggtgcaagatgccctggccgatcttgatacgggcgatccgacgatggccggg
gcgatcgagcgggtgcgcaagatcctcggtaagccgatccccttgctgctgcaaggtgaa
tccggggtgggcaaggaggtgttcgccaccgcccttcatgccaccggcccccgccgtggc
cgtcccttcgtcgccgtcaattgcgccgccctgcccgagcatctgatcgaggccgaattg
ttcggctatgcgccgggtgccttcaccggagcgcggcgcgaaggctcggctgggcggatc
cgcgaggccgagggcgggaccttgttccttgacgaaatcggcgatatgccgctggccctg
caatgccggctgctgcgcgtgctccaggaccggcaggtggtgcccttgggcggcggcaag
gcggttagcgtcgatttcgccctgatcgcggccagccatcgcccgctcaaggccgaggcc
gaggccgggcgcttccgcgccgatctttattaccgcctcaacggcctgaccctctgtctg
ccgcccttgcgggcgcgccgcgatttcgccgccctggtcgcgcgcatgatcgaaacgatg
gaacccggcgccggcatcggccttgatcccgatgtcgccgacgccctggccggccacggc
tggccgggcaatctgcgccagcttgccaatgtgctgcgcttcgcctgcgccctgcgcgat
cccggcgaaatccgcctgggctggcaccatctgcccgaagatctgatcgaggaactgcgc
tgcccgtcaggcgtggacaccgacgcgggagcggggccggcgaccctgcgcgccgcctcg
gattccctgatcgagcgcatggtggcggccagcggcggcaatctgtcggaagccgcccgg
cgtttgggcatcagccgcaataccttgtaccgcaggatgaacggctgggccaaaccgccg
gcgccgctccccatggggccggcccgtccctgcatgaaatag
DBGET
integrated database retrieval system
