Rhodospirillum rubrum ATCC 11170: Rru_A0993
Help
Entry
Rru_A0993 CDS
T00310
Name
(GenBank) transcriptional regulator, NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rru_A0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rru03000
]
Rru_A0993
Transcription factors [BR:
rru03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rru_A0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
GAF_3
AAA_5
Mg_chelatase
AAA_2
AAA
Parvo_NS1
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABC21794
UniProt:
Q2RVQ1
LinkDB
All DBs
Position
1180876..1182678
Genome browser
AA seq
600 aa
AA seq
DB search
MPDTAVAGPLFRLPPSPAEDSSLPLLTLYEVSKILGSTLDLEHSLHDVLNVLASYMQMRR
GVVTLKDAQRQLEVVAVSGMTLRNAVEGEARYPLAVAQEVVSTAMPMIVPSMAADPRFAA
FAAEADGLDDEVQSMICVPIKGGVKPFGSLSIERHRDRGTRFKFEHDVRFLTMVATLIAQ
TVSLERRVVGDRDRLIEEKARLEKALPKREKPLKGTILENVVGRSSAMMKISAQVRQIAP
SRATVLLRGESGTGKELIAQAIHYLSPRSDKPFIKVNCAALPETLLESELFGHEKGAFTG
ATTERKGRFEMASGGTLFLDEIGEITVHFQAKLLRVLQEGEFERVGGGKTIKVDVRLVAA
TNKDLEDAVTRGEFRADLYYRINVVPIFLPALRERREDVPLLAQFFLTKFNEENGRSLRF
SEGALTAMGGCNFPGNVRELENCVCRAATLAQDEVIQELGLSCHNDKCLSASLWQRRGSG
RAIGGLAPVTEQNDPDTTSVAWEGDLRPAAPARAGTPPGRGYAGPGESADSPSSPSAPPP
AAAPAAEDGEDESDAGQRERIVHAMEKAGWVQAKAARLLGMTPRQIGYALKKHDIPLKRM
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataccgccgtcgccggtcccctgttccgcctgcctccgtcgccggccgaggac
agctcgctgcctttgctgaccctgtatgaggtcagcaagatcctggggtcgaccctggat
ctcgagcattcgctccacgacgttctcaatgtcctcgcctcgtatatgcagatgcgccgg
ggggtggtgacgctgaaggacgcgcaaaggcagctcgaggtggtggcggtgtcggggatg
acgctgcgcaacgccgtggagggcgaggcgcgttatcccttggccgtcgcccaggaggtc
gtaagcacggcgatgccgatgatcgtgccgtcgatggccgccgatccccgcttcgccgct
ttcgccgccgaggccgacggtctggacgacgaggtgcagtcgatgatctgcgtgccgatc
aagggcggggtgaagccgtttggcagcctgtcgatcgagcgccatcgcgaccggggaacc
cgcttcaaattcgagcatgatgtgcgcttcctgaccatggtcgccaccttgatcgcccag
acagtcagtctggagcgccgggtggttggcgatcgcgacaggctgatcgaggaaaaggcc
cggctggaaaaggccctgccgaagcgcgaaaagccgttgaaggggacgatcttggaaaac
gtcgtcggccggtcgtcggcgatgatgaagatttccgcccaggttcgccagatcgccccg
tcgcgggcgacggttcttttgcgcggggaaagcggcaccggcaaggaactgatcgcccag
gccatccactatctcagcccgcgctccgacaagcccttcatcaaggtcaattgcgccgcc
ctgcccgagaccttgctggaatccgagctgttcggccacgagaagggcgccttcaccggg
gcgacgaccgaacgcaagggccgcttcgaaatggccagcggcggcacgctgtttcttgac
gagatcggcgagatcaccgtccacttccaggccaagctgctgcgcgtgcttcaggaaggc
gaattcgagcgggttggcggcggcaagacgatcaaggtcgacgtgcggctggtggcggcg
accaacaaggatctggaagacgcggtgacccggggcgaattccgcgccgatctctattac
cgcatcaatgtggtgccgatcttcctgccggccctgcgcgagcgccgcgaggacgtgccg
ctgctcgcccagttctttctgaccaagttcaacgaggaaaacggccgctcgctgcgcttc
tcggaaggggccttgacggcgatgggcggttgtaacttccccggcaatgtccgcgagctg
gagaattgcgtctgtcgcgccgccaccctggcccaggacgaggtcatccaggaactgggg
ctgtcgtgccataacgacaaatgcctgtcggccagcctgtggcagcgccggggaagcgga
cgggcgatcggcggtctggccccggttaccgagcagaacgatcccgataccacctcggtc
gcctgggagggcgatcttcgcccggccgccccggcgcgcgccggaacgccaccggggcgc
ggctatgccggtccgggggaaagcgccgatagcccgtcttccccatcggccccgccgccc
gccgccgcgccggccgccgaggatggcgaggacgagagcgacgccggccagcgcgagcgc
atcgtccacgccatggaaaaggccggctgggtccaggccaaggccgcccgcttgttgggc
atgacgccgcgacagatcggctatgccctgaagaagcacgatatcccgctcaagcgcatg
tag
DBGET
integrated database retrieval system
