Rhodospirillum rubrum ATCC 11170: Rru_A1142
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Entry
Rru_A1142 CDS
T00310
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00260
Glycine, serine and threonine metabolism
rru00460
Cyanoamino acid metabolism
rru00630
Glyoxylate and dicarboxylate metabolism
rru00670
One carbon pool by folate
rru00680
Methane metabolism
rru01100
Metabolic pathways
rru01110
Biosynthesis of secondary metabolites
rru01120
Microbial metabolism in diverse environments
rru01200
Carbon metabolism
rru01230
Biosynthesis of amino acids
rru01240
Biosynthesis of cofactors
rru04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rru_A1142
09102 Energy metabolism
00680 Methane metabolism
Rru_A1142
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rru_A1142
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rru_A1142
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rru_A1142
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rru_A1142
Enzymes [BR:
rru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rru_A1142
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABC21943
UniProt:
Q2RVA2
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All DBs
Position
complement(1347656..1348960)
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AA seq
434 aa
AA seq
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MEASVAPPALRNAPCAGVNAACLSAADDAVAIAIAQETTRQRESIELIASENFVSKAVLE
AQGSVLTNKYAEGYPQRRYYGGCANVDRVEDLAIARLNQLFGSTYANVQPHSGSQANQAV
FLALLAPGDTILGLDLKAGGHLTHGAPVNISGRWFTAVSYGVDPRTHLIDMEQMADLARR
HRPKLLIAGGSAYPRLLDFARFRQIADEVGAILMVDMAHFAGLVAGGVYPSPVPFADVIT
STTHKTLRGPRGGFVLTNDAAIAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALDPSFKI
YARRVVENCRVLAQTLLDGGLAITSGGTDCHLAVVDLRPLGVTGTIAEQALESIGITLNK
NAIPNDPEKPMVTSGIRVGSAAGTSRGFGPEEYRRIAALILETLHAVRAGTLEADREGIR
TRVRSLVAGFPLPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcggtcgcgccccccgcactccggaacgccccctgcgcaggcgtcaacgcc
gcctgtttgtccgccgccgatgacgccgttgccatcgccatcgcccaggagacgacacgc
cagcgcgagtccatcgagttgatcgcctcggagaactttgtgagcaaggcggtgctcgag
gcgcaggggtccgtgctcaccaacaaatatgccgagggctatccgcagcgccgctattat
ggcggatgcgcgaacgtcgatagggtcgaggatctggcgatcgcccgcctcaaccagctt
ttcggcagcacctacgccaacgtccagccccattcgggcagccaagccaatcaggcggtc
tttttggcgcttctcgcccccggtgacaccatcctggggctcgaccttaaggccggcggc
catctcacccatggcgccccggtcaatatctccggccgttggttcacggccgtcagctat
ggcgtggacccgcgaacccatctcatcgacatggagcagatggcggaccttgcccgccgg
caccggccgaagctgctgatcgccggcgggtcggcctatccgcgcctcctggactttgcg
cgcttccgccagatcgccgacgaggtgggggcgatcttgatggtcgatatggcgcatttc
gccgggttggtcgctggcggggtgtatccgtcgccggtgcccttcgctgatgtcatcacc
tcgaccacgcacaagacgctgcgcgggccgcggggcgggttcgtcctgaccaatgacgcc
gcgatcgccaagaagatcaactcggcggtctttcccggcctgcaaggcggtccgctcatg
cacatcatcgcggccaaggccgtggcgtttggcgaggcgctcgatccctcgttcaagatc
tatgcgcggcgtgtcgtcgagaattgccgcgttctcgcccaaacgctcctcgacggcgga
ctggcgatcaccagtggcgggaccgactgccatctggcggtggtcgatctgcgccccctt
ggtgtcaccggtaccatcgccgaacaggccctggaatcgatcggcatcaccctcaacaag
aatgcgatccccaacgatcccgaaaagccgatggtgacctcgggcatccgggtcggcagc
gcggcgggaacctcgcgcgggtttggacccgaggagtatcggcggatcgccgcgttgatc
ctcgagacgctgcacgctgtgcgcgccgggacgctcgaggccgaccgggagggcatccgc
acccgggtgcgcagcctcgtggcgggttttcccctgccttactga
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