Rhodospirillum rubrum ATCC 11170: Rru_A1312
Help
Entry
Rru_A1312 CDS
T00310
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00061
Fatty acid biosynthesis
rru00071
Fatty acid degradation
rru01100
Metabolic pathways
rru01212
Fatty acid metabolism
rru02024
Quorum sensing
rru04146
Peroxisome
Module
rru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rru_A1312
00071 Fatty acid degradation
Rru_A1312
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rru_A1312
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rru_A1312
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rru01004
]
Rru_A1312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rru04147
]
Rru_A1312
Enzymes [BR:
rru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rru_A1312
Lipid biosynthesis proteins [BR:
rru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rru_A1312
Exosome [BR:
rru04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rru_A1312
Exosomal proteins of breast cancer cells
Rru_A1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABC22113
UniProt:
Q2RUT2
LinkDB
All DBs
Position
complement(1548113..1549807)
Genome browser
AA seq
564 aa
AA seq
DB search
MMHDSPLPPSSLTTAPRLPLPSGPVCAMLDAIIARFPDNPAIDFLGRKWTYRELGEQIDR
ACAGFQSLGVEPGTRVGLCLPNTPYYIICYYGVLKAGGIVVNFNPLYVERELRELVEDSG
TTLMVTLDLRQIYPKVAALLGDTALERIVVCSMSAILPSVKSLLFSVLKRSELADVPTDR
RHIGFAKLIATKTPPRPVAIDPATAVAVLQYTGGTTGLPKGAMLTHANVTGNLTQILGWF
PEARWGEEKMLAVLPFFHVFAMTVAMNVALALGAELILLPRFDLETVLKTIARKKPTLFP
GVPTIYSAIIGAVAKTPYDLSSLRFCLSGGAPLPIEVKTRFEELTGCTLIEGYGLSEASP
VVCCNPLDGAIKPGSIGQPLPGTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRP
QDTEDTFIDGALRTGDIGYIDDEGYVFLVDRIKDVILCGGYNVYPRIIEEALYQHEAVAE
AVVIGLPDDYRGEAPKAFVRLRDGHSATPEDLKTYLATQISRIEMPKTIELRDDLPRTMV
GKLSKKALVDEERAKALAGADKAS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatgactccccgcttccgccttccagtctcacgacggccccgcgcctgcccctg
cccagcgggccggtttgcgcgatgctcgatgcgatcatcgcccgctttcccgataatccg
gccatcgatttcctcggccgcaaatggacctaccgcgagttgggcgagcagatcgaccgc
gcctgcgccggcttccaaagcctgggggtcgaacccggcacgcgggtcggcctctgtctg
cccaatacgccctattacatcatctgttactacggcgtgctcaaggccggcggcatcgtc
gtcaatttcaacccgctttacgtcgagcgggaattgcgcgaactggtcgaggattcggga
accacgctgatggtcaccctcgatctccgccagatctaccccaaggtcgccgccctgttg
ggtgatacggcgctcgagcgcattgtcgtctgctcgatgtcggcgatcctgccttcggtg
aaaagcctgctctttagcgtgctcaagcgctccgaactggccgatgtccccactgatcgg
cgccatatcggctttgccaagctgatcgccaccaaaaccccgccgcgccccgtcgccatc
gacccggccaccgccgtcgccgtcttgcaatacaccggcggcaccaccggcctgcccaag
ggcgcgatgctgacccatgccaatgtcacgggcaatctcacccagatcctcggctggttc
cccgaggcgcgctggggcgaggaaaagatgctcgccgttttgccgttcttccatgtcttc
gccatgaccgtggcgatgaacgtcgccctggcgctcggcgccgagctgatcttgctgccg
cgcttcgatctggaaaccgtgctcaagaccatcgcccgcaaaaagccgacgctgttcccc
ggggtgccgaccatttactcggcgatcatcggcgccgtggcgaaaaccccttacgacctg
tcgtcgctgcgcttttgtctgtcgggcggcgcgccgctgcccatcgaggtcaaaacccgc
ttcgaggagttgaccggctgcaccctgatcgaaggctacggcctgtcggaagcctcgccg
gtggtgtgctgcaacccgctcgacggcgcgatcaagccgggctcgatcggtcagccgctg
cccggcaccaccgtcgagatccgttcagtccttgatccggcgctgatcgtgccgcgcggc
gaacgcggcgagatctgcgtgcgcggcccccaggtgatggccggctattggcgccgtccc
caggacaccgaggacaccttcatcgacggcgcgctgcgcaccggcgacatcggctatatc
gacgacgagggctatgtcttcctcgtcgaccgcatcaaggatgtcatcttgtgcggcggc
tacaacgtctatccccggatcatcgaggaagcgctctatcagcacgaggcggtggccgag
gcggtggtcatcggcctgcccgatgattaccgcggcgaggcgcccaaggccttcgtccgc
ctgcgtgacggtcacagcgccacccccgaagacctcaagacctatctcgccacccagatt
tcgcgcatcgaaatgcccaagaccatcgaactgcgcgacgacctgccgcgcaccatggtt
ggcaagctttccaaaaaagccttggtcgacgaggaacgggccaaagccttggccggcgca
gacaaggcctcctga
DBGET
integrated database retrieval system
