Rhodospirillum rubrum ATCC 11170: Rru_A1752
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Entry
Rru_A1752 CDS
T00310
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rru_A1752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rru03400
]
Rru_A1752
DNA repair and recombination proteins [BR:
rru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rru_A1752
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rru_A1752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_16
AAA_21
AAA_29
nSTAND1
AAA_25
nSTAND3
AAA_23
DnaJ_CXXCXGXG
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABC22552
UniProt:
Q2RTJ3
LinkDB
All DBs
Position
2044331..2047183
Genome browser
AA seq
950 aa
AA seq
DB search
MSTQEIRVRGAREHNLRNVDVTLPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKSDVDSIEGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARIGVP
HSPATGLPIESQTVSQMVDRTLALPEGTRLYLLAPVARGRKGEFKKELAELQKKGFSRVK
VDGTIYEIPEVPALNKKIKHDIEVVVDRLVVRADIASRLADSFETALELSDGLVFAEDAV
SGERHTFSARFACPVSGFTIDEIEPRLFSFNNPFGACPTCDGLGVTLYFDPELVVPDPSR
TLNRGAVAPWSGQTPPSPYYAQALASIAAHFGADMDTPWKDLPEEMRRIILEGSGKEIIP
LSFDDGTRSYRTQKPFEGVIPNIARRWRETESNWIRDELSRYQGSAPCPACGGYRLKPQA
LAVKINGRHIGEASEVSIAEARAWFAGLEAKLSPKHREIADRILREINERLGFLGNVGLD
YLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLITLKRLRD
IGNTVIVVEHDEDAIRNADYLVDMGPGAGVHGGTIVAQGTPEQVMANPASLTGQYLTGKR
SVPVPTVRRQGNGKVLTLRGARANNLQNVDVSIPLGTFTCITGVSGGGKSTLVLETLYKA
LARQLHGARDLPGEHDAIEGAEQIDKIVDIDQSPIGRTPRSNPATYTGAFTPIRDWFSGL
PEAKARGYKPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCDVCKGKRYNRETLDV
TFKGKSIADVLDMTIEEAGDFFKAVPAVRDKMEMLQQVGLDYIRLGQQATTLSGGEAQRV
KLAKELSRRATGRTLYILDEPTTGLHFEDVRKLMEVLQALVDTGNTVVVIEHNLEVIKTA
DHIIDMGPEGGSGGGRVVAQGTPEEVAANPASHTGSYLKPYLSALARRSA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccaggaaatccgcgtgcgcggtgcgcgcgaacacaaccttcgcaatgtcgat
gtgaccttgccccgcgacaaactggtcgtgatcaccgggctgtcgggttcggggaaatcg
agtctcgcttttgacacgatctatgccgaaggccagcggcgctatgtggaatccctgtcg
gcctatgcccgccagttcctggagatgatgcaaaagtccgatgtggattcgatcgagggg
ctgtcgccagcgatttccatcgagcagaagaccacctcgcgcaatccgcgctcgaccgtc
ggcaccgtgaccgagatccacgactacatgcgcctgctgtgggcgcgcatcggcgttccc
cattccccggccaccggcctgccgatcgaaagccagacggtcagccagatggtcgatcgc
accctggccctgcccgaaggcacccggctttatctgctggccccggtggcgcgcggccgc
aagggcgagttcaagaaggaactggccgagctgcagaaaaagggcttcagccgggtcaag
gtcgatggcacgatctatgagatccccgaggtgcccgccctcaacaaaaagatcaagcac
gatatcgaggtggtggtcgaccgtctggtggtccgcgccgatatcgccagccggctggcc
gattcctttgaaaccgcccttgagctctccgatggactggtcttcgccgaagacgcggtc
tcgggcgagcgccacaccttttccgcccgcttcgcctgcccggtcagcggcttcaccatc
gacgagatcgaaccccggctgttctcgttcaacaatcccttcggcgcctgtccgacctgt
gacggcctgggggtgacgctgtatttcgaccccgagctggtggtgcccgatcccagccgc
accctcaatcgcggcgccgtcgccccgtggtcgggacaaaccccgccctcgccctattac
gcccaggcgctggcgagcatcgccgcccatttcggcgccgatatggacacgccgtggaag
gatctgcccgaggagatgcgccggatcatccttgaaggctcgggcaaggagatcatcccg
ctcagcttcgatgacggcacgcgcagctatcgcacccagaagcccttcgaaggcgtcatc
cccaatatcgcccggcgctggcgcgagaccgaaagcaactggatccgcgacgaattatcg
cgctaccagggttcggccccctgcccggcctgcggcggctatcgcctgaagccccaggcc
ctggcggtcaagatcaacggccgccatatcggcgaggcctccgaggtttcgatcgccgag
gcccgggcctggttcgccgggctcgaggccaaactcagccccaagcaccgcgagatcgcc
gaccgcatcttgcgcgagatcaacgagcgcctgggctttctcggcaatgtcggccttgat
tatctcagcttgtcgcgcaattcgggcacactctcgggcggcgaaagccagcgcatccgc
ttggccagccagatcggttcggggttgaccggggttctttatgtgctcgacgagccgtcg
atcggcctgcaccagcgcgataacgaccgcctgctgatcacgctcaagcgcctgcgcgac
atcggcaatacggtgatcgtcgtcgagcacgacgaggacgccattcgcaacgccgattat
ctggtcgacatggggcccggggcgggcgtccacggcggcaccatcgtcgcccagggcacg
cccgaacaggtgatggccaatcccgccagcctgaccggccagtatctgaccggcaagcgc
agcgtgccggtgcccacggttcgccgccagggcaatggcaaagtcctgaccctgcgcggg
gcgcgggccaataatctgcaaaacgtcgatgtgtccattccgcttggcaccttcacctgc
atcaccggcgtctcgggcggcggcaaatcgaccctggttttggaaaccctttacaaggcg
ttggcccgtcagcttcacggggcgcgcgatctgcccggcgagcatgacgccatcgaaggc
gccgagcagatcgacaagatcgtcgatatcgaccaatcgccgatcggccgcacgccgcgc
tccaaccccgccacctatacgggcgccttcacccccatccgcgactggttctcgggcctg
cccgaggccaaggcccggggctataagcccggccgcttctcgttcaacgtcaagggcgga
cgctgcgaagcctgccagggcgacgggctgatcaagatcgagatgcacttcctgcccgat
gtctatgtcacctgcgatgtctgcaagggcaagcgctacaaccgcgaaaccctggatgtc
accttcaagggcaaatcgatcgccgatgtgttggatatgacgatcgaagaggccggtgac
ttcttcaaggcggtgccggcggtgcgcgacaagatggagatgctccagcaggtcgggctt
gattatatccgcctcggccaacaggcgacgaccctgtcgggtggcgaggcccagcgcgtc
aagctggccaaggaactgtcacgccgggcgaccgggcgaacgctttatatcctggatgag
ccgaccaccggcctgcatttcgaggatgtgcgtaagctgatggaggtgctgcaggccctg
gtcgatacgggcaatacggtggtggtgatcgagcataacctggaagtgatcaaaaccgcc
gaccatatcatcgacatggggccagaaggcggatcgggcggcggccgggtggtggcccaa
ggcactcccgaggaggtcgcggccaatccggccagccataccggcagctatctcaagccc
tatctctcggccctcgcccggcgcagcgcgtaa
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