Rhodospirillum rubrum ATCC 11170: Rru_A1940
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Entry
Rru_A1940 CDS
T00310
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00280
Valine, leucine and isoleucine degradation
rru00650
Butanoate metabolism
rru00907
Pinene, camphor and geraniol degradation
rru01100
Metabolic pathways
rru01120
Microbial metabolism in diverse environments
rru04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rru_A1940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rru_A1940
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rru_A1940
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rru_A1940
Enzymes [BR:
rru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Rru_A1940
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Motif
Pfam:
HMGL-like
OmpA
Motif
Other DBs
NCBI-ProteinID:
ABC22740
UniProt:
Q2RT05
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Position
complement(2247477..2248391)
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AA seq
304 aa
AA seq
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MSPDAVRLVEVGPRDGLQNEAGVVPLAAKVALIDALSAAGLPVIEAGAFVAPGRVPQMAD
SAAVLAAIHRRAGVRYPVLVPNLKGLKAATEAVGVDDIAVFAAASETFSKKNINCSIAES
LERLAEVAARAKDRGIAVRGYVSCVLGCPYEGAVAIDRVVEVAAALAAMGCHEISLGDTI
GVGTPRRAREMVQAVAGAVPVQRLAAHFHDTYGQALANILAVLEIGVTTFDCSVAGLGGC
PYAPGASGNVATEDVVYMLDGMGIASGVDLEKLRLAGLALCQTLGRPPASRAARALAARK
GRGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgatgccgtgcggctggtcgaggtcggtccgcgcgacggcctgcagaacgag
gccggggtggtgccgctggccgccaaggtggcgctgatcgacgccctgtcggcggccggg
ctgccggtgatcgaggcgggcgccttcgtcgcccccgggcgggtgccgcagatggccgat
agcgccgccgttctggcggccatccaccggcgggcgggggtgcgctatccggttctggtg
cccaatctcaagggcctgaaggcggcgaccgaggcggtgggcgtggacgatatcgccgtg
ttcgccgccgcctccgagaccttttcaaaaaagaacatcaactgctcgatcgcggaaagc
ctggagcgtctagccgaggtcgccgcgcgggccaaggatcgcggcatcgccgtgcgcggc
tatgtgtcgtgcgtgcttggttgtccctatgagggcgcggtggcgatcgaccgggtggtc
gaggtggcggcggccctggccgccatgggctgccacgagatcagcctgggcgataccatc
ggcgtcggcacgccgcgtcgggcgcgggagatggtccaggcggtggccggagcggtgccg
gtccagcggttggccgcccatttccacgacacctatggtcaggccctggccaatatcctg
gcggtgctcgaaatcggcgtcaccacctttgactgttcggtcgccggtctgggcggctgc
ccctatgccccgggggccagcggcaatgtggcgaccgaggatgtggtctatatgcttgac
ggcatggggatcgccagcggcgtcgatctagagaagctgcgcctcgccggtctggcgctt
tgccagaccctggggcgccccccggcctcgcgcgccgcccgcgcgctggcagcgaggaaa
gggcgtggcggctaa
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