Rhodospirillum rubrum ATCC 11170: Rru_A2008
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Entry
Rru_A2008 CDS
T00310
Name
(GenBank) Thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00730
Thiamine metabolism
rru01100
Metabolic pathways
rru01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rru_A2008
Enzymes [BR:
rru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Rru_A2008
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABC22808
UniProt:
Q2RST7
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Position
2320063..2321928
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AA seq
621 aa
AA seq
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MTAPFLSSLSPTSPLASATAPFPGSRKVYARPADAPHLRVPFREIILSDPGEAPVRVADP
SGPYSDPEATIDLRQGLARHRASWASARGNSTVTAGRPAPSEGDFEAFPLTYAPLRRRDE
TPFTQLEYARAGVITDEMIYVATRENLGRDSAVAGACARLAGGEAFGAALPAHVTPEFVR
AEIAAGRAIIPANINHPELEPTIIGRNFLVKVNANIGNSALGSSIEDEVAKLVWAIRWGA
DTVMDLSTGKAIHATREWILRNSPVPIGTVPLYQALEKVGGDATRLDWAVFEDTLIEQCE
QGVDYFTIHAGVRLAHIPLTASRTTGIVSRGGSILAKWCLSHHRENFLYERFADICAILR
RYDVAFSLGDGLRPGSVADANDAAQFAELDTLGALTAVAWEHGCQVMVEGPGHVPMHKIK
ANMDRQLATCGEAPFYTLGPLTTDIAPGHDHITSAIGAAMIGWFGTAMLCYVTPKEHLGL
PDRADVKAGVIAYKLAAHAADIAKGHPAAQLRDDAISRARFDFRWSDQFNLGLDPEGARA
FHDETLPHAAHKTAHFCSMCGPKFCSMKISHDIRDGALEGADALTQAGLDQMSATFRASG
GEVHLDAQALDALAWEGKPAR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccgtttttatcctccctatcccccaccagtccgctggccagcgccacggcg
ccctttcccggctcgcgcaaggtttatgcccgcccggccgacgccccccatttgcgcgtg
ccctttcgcgagatcatcctgtccgacccgggcgaagccccggtgcgggtggccgaccct
tcgggcccctatagcgatcccgaggcgacgatcgatctgcgccagggattggcccgccat
cgggcgtcttgggccagcgcccggggcaattccacggtcacggccggccgccccgccccg
agtgaaggcgatttcgaggcctttcccctgacctacgcccccttgcgccgccgcgatgag
acccccttcacccaactggaatacgcccgcgccggagtgatcaccgacgagatgatctat
gtggcgacgcgggagaacctgggccgggacagcgccgtggccggggcctgcgcgcggttg
gcgggcggcgaggcctttggcgccgccctgcccgcccatgtcacgcccgagttcgtccgc
gccgagatcgccgccgggcgggcgatcatcccggccaacatcaaccatcccgagcttgaa
ccgacgatcatcggccgcaacttcctggtcaaggtcaacgccaatatcggcaattcggcc
ctgggatcgtcgatcgaggacgaggtggcaaagctggtctgggccatccgctggggggcc
gacacggtgatggatctgtcgacgggcaaggccatccacgccacccgcgaatggatcttg
cgcaacagtccggtgcccatcggcaccgttcccctgtatcaggctttggaaaaggtgggc
ggcgacgccacccgccttgactgggcggtgttcgaagacaccctgatcgaacaatgcgaa
cagggcgttgattatttcaccatccatgccggggtgcggctggcccatattccgctgacc
gcgtcgcgcaccaccggcatcgtcagtcgcggcggttcgatcctggccaaatggtgcttg
tcccaccaccgcgagaatttcctttatgagcgcttcgccgatatctgcgccatcctgcgc
cgctatgacgtggccttttcgctaggcgacggcctgcgcccgggatcggtggccgatgcc
aatgacgccgcccaattcgccgaactcgacactttgggcgccttgacggcggtggcctgg
gagcacggctgtcaggtgatggtcgaaggcccgggccatgtgcccatgcacaagatcaag
gccaatatggaccgccaactcgccacctgcggcgaggcgccgttctataccctggggccc
ttgaccaccgatatcgcgcccggccacgaccacatcacctcggcgatcggcgcggcgatg
atcggctggttcggcaccgccatgctgtgctacgtcacccccaaggaacacctggggctg
cccgatcgcgccgacgtcaaggccggggtgatcgcctataagctggccgcccatgccgcc
gatatcgccaaggggcatcccgccgcccagctgcgcgacgacgccatcagcagggcgcgc
ttcgatttccgctggagcgaccagttcaacctcggcctcgatcccgaaggcgcgcgggcc
ttccacgacgaaaccctgccccatgccgcccataagacggcgcatttctgttcgatgtgc
gggccgaagttctgttcgatgaagatcagccatgatatccgcgacggcgccctcgagggg
gcggacgccctgacccaggccggactggaccagatgagtgcgaccttccgcgccagcggc
ggcgaggtccaccttgatgcgcaagctctcgacgccctcgcctgggaggggaaacccgcg
cgataa
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