Rhodospirillum rubrum ATCC 11170: Rru_A3435
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Entry
Rru_A3435 CDS
T00310
Name
(GenBank) conserved hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rru03400
]
Rru_A3435
Enzymes [BR:
rru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rru_A3435
DNA repair and recombination proteins [BR:
rru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Rru_A3435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABC24229
UniProt:
Q2RNR6
LinkDB
All DBs
Position
complement(3955832..3958888)
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AA seq
1018 aa
AA seq
DB search
MRPDAVQTIPAGLPFLDTLAAGIVDRLGDRTADPLAATRVTVLLPTRRACRALREAFLRI
EGGKAALLPRILPLGDLEEDESAGAGLADGALRPTLDFAPPIAPLERQVLLARLILARDS
AKATAGGDSAMTPAQALRLAQDLAGLLDLAQTEHIDLSTVAALVPQTSPLAEHWQLTLDF
LALLTSVWPGLLAAHHALDPADHRNKVLDAQAAAWAAHPPAGPVIAAGSTGSVPATAALL
ATIAHLPQGLVVLPGLDIGLDDESWEALEDSHPQAGMKRLLDTLGLSRQAVRFFSETPPR
GAIAAPPARALLVREALRPAATTDRWRRLRESGPSGGEAFARALDGVTLVRAAGPREEAA
AIAVMMRGALETPGRTAALITPDRALARRVAAALGRWGLRVDDSAGRPLSQTPVGAFLRL
AAQAVADGLGPVALLSLLQHPLAAGGEDPVVFRARLRLLDREVLRGPRPDPGVAGLAQAI
KAADDPDMERHLGGWLERLEALAGPFCTLMDSDEPVDVAALIDAHMRFCEGLAEAREGGV
EKPGATRLWAGDDGEAAALLGADLTEAAPSLGAIAPRHYPALLDALMDGRAVRPKRDLHS
RLFLWGPLEARLQRADLLILGGLNEGGWPAAVDTGPWMSRPMLDQIGLPQPERRIGLAAH
DVSQALCAPEVAITRALRVEGTPTVPSRWLTRLDAVIGATGLDKEWAKARQRGDRLLALA
RSLEQPQGERKPCPAPEPRPPLADRPRRLSVTRIETWMRDPYALYAQFILGLSELDPLEA
DPGVSDYGTLVHGALEDFVGLYPKDLPGDPEAEIIRLGTLRFAPHMTRPGVRAFWWPRFL
RIAHWIAEREIERRPEILEVFAERRAEMTLTGPAGPFILTAKADRIDLRRDGTLAVIDYK
TGMLPSKKEVESGLSPQLPLEALLASRGCFPGIAGKPVSDLGFWKLRGDRLGGEIRQAAD
DPEGVAEAAHKGLSDLITAFDNPDTPYFARPHPDHAPRFNPYQHLARVKEWAEKGDAE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgacgccgtccaaaccattcccgccggactgcccttcctcgacaccctggcg
gcgggcatcgtggaccgactgggcgaccggacggccgatccgctggccgccacccgcgtc
accgtgctgttgccgacgcggcgcgcctgccgggccctgcgcgaggccttcctgaggatc
gagggcggcaaggccgccctgctgccgcgcatcctgcctttgggcgatcttgaagaagac
gaatcggccggggccggactggccgatggcgctctccgcccaaccctcgacttcgcgccg
cccatcgcgccgctcgaacgtcaggtgctgctggcgcggctgatcctcgcccgcgatagc
gccaaggccacggcgggcggcgatagcgccatgaccccggcccaggcgctgcgcctcgcc
caggatctggccgggctgctcgatctggcgcagaccgaacacatcgacctgtccaccgtc
gccgccctggttccccaaacctcgccgctggccgagcactggcaactcacccttgatttc
ctcgccctgctgacctcggtttggccgggattgctggccgcccaccacgcccttgatccc
gccgaccatcgcaacaaggtgctcgacgcccaagccgccgcctgggccgcccatccgccg
gccggcccggtgatcgccgccggctccaccggatcggtcccggccaccgccgccctgctc
gccaccatcgcccatctgccccaggggctggtggtgttgcccggccttgacatcgggctt
gatgacgaaagctgggaggccttggaagacagccatccccaggccggcatgaaacgcctg
ctcgacaccctgggcctgtcgcgccaggccgtgaggtttttttccgaaaccccgccccgg
ggcgcgatcgccgcgccaccggcccgtgcgcttttggtgcgcgaggccctgcgcccggcc
gccaccaccgatcgctggcgacggctgcgcgagagcggtccctcgggcggggaggccttc
gcccgggcacttgacggggtcaccctggtgcgcgccgccggcccgcgcgaggaagccgcc
gccatcgccgtgatgatgcgcggcgccttggaaacccctgggcgcaccgccgccctgatc
acccccgatcgcgccctggcccgccgggtcgccgccgcccttggccgctggggattgcgc
gtcgatgacagcgccggccggccgctgtcgcaaacccccgtcggcgccttcctgcggctg
gccgcccaggcggtggccgatggcctggggccggtcgccctgttgtcgctgcttcagcat
cccttggcggctggcggcgaggatccggtggtctttcgcgcccgcctgcgcctgctcgac
cgcgaggtcctgcgcggcccgcgtcccgaccccggggtggctgggctcgctcaggcgatc
aaggccgccgatgatccggacatggagcgccaccttggcggttggctggagcggcttgaa
gctttggccgggccgttctgcaccctgatggacagcgacgagccggtcgacgtcgccgcg
ctcatcgatgcccatatgcgcttttgcgaagggctggccgaggcccgcgagggtggcgtg
gaaaagcccggcgccacccggctgtgggctggtgacgatggcgaggccgccgccctgctt
ggcgccgatctgaccgaagccgccccctcgctgggcgccatcgcgccccgccactacccg
gccctgcttgatgccctgatggacgggcgggcggtgcggcccaagcgcgatcttcattcg
cggctgttcctgtggggaccgctggaagcccgcttgcagcgcgccgatctgctgatcctg
ggcgggctgaacgagggcggttggccggccgccgtcgataccggcccgtggatgagccgg
ccgatgctcgatcagatcggcctgccccagcccgagcgccgcatcggcttagccgcccac
gacgtttcccaggcgctctgcgcccccgaggtggcgatcacccgggccctgcgcgtcgag
ggcacgccgaccgtgccttcgcgctggctgacccgccttgacgcggtgatcggcgccacc
ggattggacaaggagtgggcgaaggcccgccagcgcggcgaccgcctgctcgccctggcc
cgcagcctggaacagccccagggtgaacgcaaaccctgccccgcccccgagccgcgcccg
ccgctggccgaccggccgcgccggctgtcggtcacccgcatcgaaacctggatgcgcgac
ccttacgccctctatgcccagttcatcctggggctgagcgagcttgatcccctggaggcc
gaccccggggtgtccgattacggcaccctggtccacggcgcccttgaggatttcgtcggc
ctttatcccaaggacctgcccggcgaccccgaggccgagatcattcgcctgggaaccctg
cgtttcgccccgcatatgacgcggccgggcgtgcgcgccttctggtggccgcgcttcctg
cgcatcgcgcattggatcgccgagcgtgagatcgaacgccgccccgagatccttgaggtc
ttcgccgaacgccgcgccgaaatgaccctgaccggtccggccggccccttcatcctgacc
gccaaggccgatcgcatcgatctgcgccgcgatggcaccctggcggtgatcgactataaa
accggcatgctgccctcgaaaaaggaagtcgagtcggggttgtcgccgcagttgcccctg
gaagcgcttctcgcctcgcgaggctgctttcctggcattgccggcaagccggtcagcgat
cttggcttctggaagctgcgcggcgatcgcctgggcggcgagatacgccaggccgccgat
gatcccgagggggtggccgaagcggcccataagggcttgagcgatctgatcaccgccttt
gataatcccgacaccccctatttcgcccgcccccatcccgaccacgccccgcgcttcaat
ccctatcagcatctggcccgggtcaaggaatgggccgagaaaggcgacgccgaatga
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