Rhodospirillum rubrum ATCC 11170: Rru_A3473
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Entry
Rru_A3473 CDS
T00310
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru03030
DNA replication
rru03430
Mismatch repair
rru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rru_A3473
03430 Mismatch repair
Rru_A3473
03440 Homologous recombination
Rru_A3473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rru03032
]
Rru_A3473
03400 DNA repair and recombination proteins [BR:
rru03400
]
Rru_A3473
Enzymes [BR:
rru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rru_A3473
DNA replication proteins [BR:
rru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rru_A3473
DNA repair and recombination proteins [BR:
rru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rru_A3473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
AAA_16
RuvB_N
AAA_14
AAA_19
AAA_18
DNA_pol3_delta_C
AAA_assoc_2
SRP54
TsaE
DUF815
Motif
Other DBs
NCBI-ProteinID:
ABC24267
UniProt:
Q2RNM8
LinkDB
All DBs
Position
complement(3996560..3998539)
Genome browser
AA seq
659 aa
AA seq
DB search
MRPVDPAPGMSDQVTPDSEAPSSEKPAGSKATPASAPYRVLARKYRPASFDALIGQEALV
RTLTNAIDSGRLAQAWMLTGVRGVGKTTTARLIARALNCVGADGKGGVTITPCGVCEHCK
AIAEDRHVDVLEMDAASRTGVGDIREILDGVRYRPAVARTKVYIIDEVHMLSTAAFNALL
KTLEEPPEHVKFIFATTEIRKVPVTVLSRCQRFDLRRVSAAELSGHFLRIAGLEGAEIAP
SALTLIARAADGSVRDGLSLLDQAIAHGGGTVSEAQVAEMLGLADRARIFDLLDALLAGR
IAESLDLLDRQYALGADPLVIVQDLLDLVHWMTRVKVVPVSAEDAAVPEAERTRGRAMAE
RLSMAVLNRCWQILLKGLGEARGAPVPLQAVEMVLIRLAYASDLPTPEEALKMIAGGAQP
AAPRPPAPHSPAGPPPAAPPPPSPPSRADEPPRPSRPSQSNAGGGALAVAPVEVAPDPPP
PPPPPPAPPAADPAGAFDPVPRSFALLVDLFRRKREAVVTGHLYRDVELVGYDPEAGLLE
IHPLPAAPAKLAGQITRLLGEWTGRRWMVTLTDRPGQPTLHDATQADIHAHPLVKAVLDR
FPGAVIGTIREHPGAVAAEADSPDLLGDPGEAYGAPGFDTPAGADPDDLFDPFIGDDET
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgttgacccggcccccggtatgagcgatcaggtgacacccgactccgaggcc
ccctcctccgagaagcctgccggttcaaaagccaccccggcgtccgcgccctaccgtgtt
ctcgcccgcaaatatcgcccggcgtcctttgacgccctgatcggccaggaagccctggtc
cgcaccctgaccaacgccatcgacagcgggcgactggcccaggcctggatgctgacgggc
gtgcgcggggtgggcaagaccaccaccgcccggctgatcgcccgcgccctgaattgcgtc
ggcgccgatggcaaggggggcgtgaccatcacgccctgcggcgtctgcgagcattgcaag
gcgatcgccgaagaccgccatgtcgatgtgctggagatggacgccgccagccgcaccggc
gttggcgatatccgcgagatccttgatggcgtgcgctaccgcccggcggtggcccgcacc
aaggtttacatcatcgacgaagtccacatgctctcgaccgccgccttcaacgccctgttg
aagacgctcgaagagccgcccgagcatgtgaaattcattttcgccaccaccgagatccgc
aaggtcccggtcaccgttctgtcgcgctgccaacgcttcgacctgcgccgggtcagcgcc
gccgagctttcgggccatttcctgcgtatcgccgggctggaaggcgccgagatcgcccca
agcgccctgaccctgatcgcccgcgccgccgatggatcggtgcgcgacggcttgtcgctg
cttgatcaggcgatcgcccatggcggcggcacggtttccgaagcccaggtcgccgagatg
ctgggactggccgaccgcgcccgcatcttcgacctgctcgacgccctgctcgccggccgc
atcgccgaaagcctcgacctccttgatcggcaatacgccctgggcgccgatccgctggtc
atcgttcaagatctgcttgatctcgtccattggatgacgcgggtgaaggtggtgccggtc
tcggccgaggatgccgccgttcccgaggccgagcgcacccgtggccgggcgatggccgag
cgcttgtcgatggcggtgctgaaccgctgctggcagatcctgctcaaaggcctgggcgag
gcgcgcggcgccccggtgccgcttcaggccgtcgaaatggtgctgatccgtctggcctat
gccagcgacctgcccacccccgaggaggccttgaagatgatcgccggcggtgcccagccc
gccgccccccgcccgccggccccccactcgcccgccggtcccccccccgccgcgccgcct
cccccttcgccgccgtcccgggccgacgagccgccgcgcccgtcccgcccgtcgcaatcg
aacgccggcggcggcgccctggccgtagcgccggtggaggtcgcccccgatcccccgccc
ccgcccccgcccccgccggccccaccggccgccgatccggccggcgccttcgacccggtg
ccgcgcagcttcgccctgctcgtcgatctgttccggcgcaagcgcgaagccgtggtcacc
ggccatctgtatcgcgatgtcgaactggtgggctatgatcccgaggctgggctgctggag
atccatcccctgcccgccgcgccggccaaactggccggccagatcacccgcctgctcggc
gaatggaccggccggcggtggatggtgacgctgaccgaccgtcccggacagccgaccttg
catgatgccacccaggccgatatccatgcccatccgctggtcaaggcggtgctggaccgc
tttcccggggcggtgatcggaaccattcgcgagcatcccggagccgtcgcggccgaggcc
gattcgcccgacctcctcggcgatcctggcgaggcttatggcgcgcccggcttcgacacc
ccggcgggcgccgatccagacgatctgttcgacccattcatcggagacgacgagacatga
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