Rhodospirillum rubrum ATCC 11170: Rru_A3480
Help
Entry
Rru_A3480 CDS
T00310
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rru
Rhodospirillum rubrum ATCC 11170
Pathway
rru00300
Lysine biosynthesis
rru01100
Metabolic pathways
rru01120
Microbial metabolism in diverse environments
rru01230
Biosynthesis of amino acids
Module
rru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rru_A3480
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rru01002
]
Rru_A3480
Enzymes [BR:
rru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Rru_A3480
Peptidases and inhibitors [BR:
rru01002
]
Metallo peptidases
Family M20
Rru_A3480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ABC24274
UniProt:
Q2RNM1
LinkDB
All DBs
Position
4004973..4006187
Genome browser
AA seq
404 aa
AA seq
DB search
MSALPLRWTAAELADPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEG
GERVDNLYARRGGAGPCFGFAGHTDVVPAGDGWSRPPFGAEVVDGALVGRGAADMKGGIA
CFVAAVARLISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDL
CLVGEPTNPEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAE
TLDDGTAHFQPSSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLA
ACDGDESGFSLVLEHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSH
CPVAEFGLVGRTMHKPDERVAVADLEALSEIYRRVLVGFFEAPC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgcgcttccccttcgctggactgcggccgaattggccgatcccttggctttggcc
cgggcgctggtggcttgccccagcgtcaccccgcgtgatgccggggcccttgatgttctt
gaatccgccctgatcgccttgggcttccgctgcgttcgcctgccctttggcgccgagggc
ggcgagagggtggataatctgtatgcccgccgcggcggcgccggcccctgtttcggattc
gccggccatacggatgtcgtgcccgccggcgacggctggagccggccgccctttggcgcc
gaagtggtcgatggtgccctggtcggccggggagcggccgatatgaaaggcggcatcgcc
tgtttcgtcgccgccgtcgcccggttgatttccggacccgattccacgggatcgatttcc
agacacgatcccacgggatcgatcgccctgctgatcaccggcgacgaggagggccccgcc
cttcacggcacccgcaaggtgctggagtggatggagggggctggcgaaaggatggatctg
tgtttggttggcgagccgaccaatcccgaaggcctgggcgacatgatcaagatcggtcgg
aggggcagcctgaccgccaccgtcacccttctcggccgcgccggccatgtcgcctatccc
catctcgccgataacccccttcatcggctctcgacgttgaccggcctgctgctggccgag
accctggacgacggcacggcgcatttccagccttctagcctgcagctgaccagcatcgat
gtcggcaatccggccgccaatgtcattcccgccaaggccaccttgcgcttcaatatccgc
ttcaacgatcgccatagcggcgagtcgctgtcggcctggatccgcgcccgctgtctggcg
gcctgcgatggcgacgaaagcggcttttccctggttttggagcatagcggcgatgccttc
ctgacgccgcccggcccgctgtcggatctgatcgccacggcctgtcaggcggtcaccggc
cggcggccggagctgtcgacctcgggcggcacctccgatgcccgtttcattcgcagccat
tgcccggtggccgaattcggtctggtcgggcgaaccatgcacaagcccgatgaacgggtg
gcggtggccgatctcgaagccttaagcgagatctaccgccgggttctggtcggtttcttc
gaggccccatgctga
DBGET
integrated database retrieval system
