Robiginitalea rubriflava: ACT6NU_10985
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Entry
ACT6NU_10985 CDS
T11996
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rrv Robiginitalea rubriflava
Pathway
rrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACT6NU_10985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrv03019
]
ACT6NU_10985 (recQ)
03400 DNA repair and recombination proteins [BR:
rrv03400
]
ACT6NU_10985 (recQ)
Enzymes [BR:
rrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACT6NU_10985 (recQ)
Messenger RNA biogenesis [BR:
rrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACT6NU_10985 (recQ)
DNA repair and recombination proteins [BR:
rrv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACT6NU_10985 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
YAB75089
LinkDB
All DBs
Position
2423098..2425299
Genome browser
AA seq
733 aa
AA seq
DB search
MTLNEIDLKASLKKYFGFSQFKGLQEDVIEKIIQGEDTFVIMPTGGGKSLCYQLPALIKD
GTAIVVSPLIALMKNQVDAIRGVSDRAGIAHVLNSSLSKADVRQVMQDIKDGVTKLLYVA
PESLTKEDYVDFLKGVELSFVAIDEAHCISEWGHDFRPEYRNLRSIINRLGDNIPLIALT
ATATPKVQEDILKNLGMPDAHVFKASFNRPNLYYEVRPKTKEVDADIIRFVKKNAGKSGI
IYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEEVDVVVATIAFGMGI
DKPDVRYVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMAGKPVAEQ
EIGNALLQEIVAYAETSISRRKFILHYFGEEFDEVNGEGANMDDNVRNPKEKEEARDNVV
KLIKAVKETKEKFKAKEIVKTLTGSTNALIASHKTEKKEVFGSGSDRDKAYWMALIRQVL
VAGLLHKEIEQYGILHLTEKGEAFLKNPRSFMMTKDHVYSATADASPVGGNRSAGAASDT
TLLKLLKDLRKKEAHKREVPPFVIFQDPSLEDMALKYPVNQEELINVHGVGEGKARKYGK
PFLDLIATYVSENDITRPDDLVVKSTGANSGLKLYIIQNVDRKLPLDDIAAAKGLEIPEL
VKEMEQIVFSGTKLDLGYWIDEILDEDQQHEIHEYFLEAETDNIEAAMTEFDGEYEDDEL
RLYRLKFMSEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactttgaatgaaattgatcttaaggcatcactaaaaaagtactttggtttttcccag
tttaagggtcttcaggaagacgttattgaaaaaatcattcagggagaagacacctttgta
ataatgcctacaggaggcgggaaatcgctgtgttatcaactaccagcgcttatcaaagac
ggtacggctattgttgtttcccctttaattgcgctgatgaagaaccaggttgatgccatc
cgcggggtatcggacagggccggcattgcacatgtgctgaactcatccctctccaaggca
gatgtccggcaggtgatgcaggatataaaagatggagtgaccaaattgctttatgtagct
cccgagtcccttacaaaggaagattatgtcgatttcctgaaaggggtggaactgtctttt
gtggccattgacgaggcgcattgcatatccgaatggggccacgacttcaggccggaatac
cgcaaccttcggagtattatcaaccgtctgggagacaacatcccattaattgcccttaca
gccaccgcaacgcccaaagtacaggaggacatccttaagaacctcgggatgcccgatgct
catgtctttaaagcctcctttaacaggccaaacctgtattacgaggtccggcccaaaacc
aaggaggtggatgcagatatcatccgttttgtcaaaaaaaatgccggtaagtccgggatt
atctattgccttagccgaaaacgagtggaagaactggcacaggtattacaggtaaacggt
gtaagtgcggttccctatcacgccggctttgatgcgaaaacccgttccaaataccaggat
atgttcctgatggaggaggtagacgtggtagtagccactattgcctttgggatggggata
gataaaccggatgtgcgttatgtgatccaccatgatattcccaaaagcattgagagttat
tatcaggaaaccggaagggccggaagggatgggggagaaggccactgccttgccttttat
tcctacaaggatatagaaaagctcgaaaaatttatggccgggaagcccgtggccgaacaa
gagatcgggaatgcccttttacaggaaatagtggcgtatgccgaaacctccatttccagg
cgaaagtttatactccattattttggcgaggaatttgacgaggtaaacggggagggggcg
aatatggatgacaacgtccgcaaccccaaagaaaaagaagaagccagggacaacgtcgtc
aaacttattaaagctgtaaaagagaccaaggaaaaatttaaggcaaaggaaatagttaaa
actcttacaggatccacaaatgccctgattgcttcacacaaaacagagaaaaaggaagtt
ttcggttccgggtcggaccgggataaggcctattggatggcattgatccgtcaggtgctg
gtagctggcctgctccacaaggaaattgaacaatacggaatactgcaccttactgaaaaa
ggggaagcctttttgaagaatccgcggtcctttatgatgaccaaggaccacgtgtattcg
gctaccgctgatgcaagccctgttggcggcaaccgatctgccggggcagcttccgatact
acgctgctgaaattattaaaagacctcaggaaaaaagaggcgcataaacgggaagtccca
ccttttgttatctttcaggacccatccctggaggacatggctttaaaatatccggtaaac
caggaagaattaattaatgtgcatggggtgggtgaaggcaaggccagaaaatacggaaaa
ccatttctcgatctgattgccacctatgtatccgaaaatgacatcacccgtccggatgac
ctggtggtgaaaagtaccggcgcaaattcaggcctaaaattatatatcatccagaatgtg
gaccggaaattacccctggatgacatcgctgcggctaaaggacttgagattcccgagttg
gtcaaagaaatggaacaaatcgtttttagcggcaccaagctggacctggggtactggata
gacgaaatcctggatgaagaccagcaacatgaaatacacgagtattttctggaagccgaa
acggacaatattgaagcagcaatgactgagttcgacggggaatacgaggatgacgaacta
cggctgtaccggcttaaatttatgagcgaggtggcgaattaa
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