Rathayibacter rathayi: C1O28_00880
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Entry
C1O28_00880 CDS
T05845
Name
(GenBank) RNA helicase
Organism
rry
Rathayibacter rathayi
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZZ47923
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Position
167592..169691
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AA seq
699 aa
AA seq
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MPKNKKPAGGRPAKNFEPNRFGASSGKSQLGGRSRFPAAKPGSRSEGHRGFRPIDENAPK
KARWNADERAARATERTERPARGYDRDERPSRSFGRDERPSRGYDRDARPARGGDRDDRP
GRSYDREARPARGYDRDTRPARSHDRDERPARSNDRNERPARSFDRDARPARSHDRDERP
ARSYGRDERPARTNDRDVRPARGYDRSDRPARSSDRSDRPARSFDRDERPARSYDRGDRP
SRSFDQDARPSRSHGRGDRPTRSYDRDSRPSRRDSGSDFYPSRDARTPHQADDVVLERLE
ATATLAVDVEGVTFGDLGLGGNIVRMLTELGAASPFPIQAATIPEVLAGKDVLGRGKTGS
GKTIAFGAPVVERLMENNGAKGRKPGRAPRALILAPTRELAMQIDRTIQPIARSVGLFTT
TIYGGVPQYKQVGALQRGVDIVIATPGRLEDLVEQGRLDLSNITITVLDEADHMCDLGFL
EPVQRILRQTIDGGQRLLFSATLDKGVATLVDEFLVDPSVHEVAGEDQASSSIDHRVLLI
EHRDKAEIIEQLAARDGKTLIFTRTRAFAEQLAEQLDHADIPATSLHGDLNQSRRTRNLA
LLTSGRVDVLVATDVAARGIHVDDIDLVIQADAPDEYKTYLHRSGRTGRAGKKGTVVTLI
TRNRRRRMEELLDRAEIEAEMVDARPGDRILREISAAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaacaagaagcctgccggtggccgtccggccaagaactttgaacccaaccgc
tttggcgcctccagcgggaagtcgcaactcggcggacgctcgcgcttccccgcggccaag
cccggctcgcgcagcgagggccaccgcggcttccgcccgatcgacgagaacgcgcccaag
aaggcgcggtggaacgccgatgagcgcgcggcgcgcgccaccgagcgcacggagcgcccg
gcccgcgggtacgaccgcgacgagcggccgtcccgctccttcggtcgcgacgagcgaccc
tcccggggttacgaccgcgatgcgcgaccggcgcgtggcggcgaccgcgacgaccggccc
ggccgctcgtacgaccgcgaagcccgcccggcacgcggctacgaccgcgatacccggcct
gctcgctcccacgaccgcgacgagcgtcctgcgcgctcgaacgaccggaacgagcgtccg
gctcgctccttcgaccgcgatgcgcgtcctgctcgctcccatgaccgcgacgagcgtccg
gctcgttcctacggacgcgacgagcggcccgcccgcacgaacgatcgcgacgtccgtccg
gcccgcggctacgaccgcagcgaccggcccgcccggtcctctgaccgcagcgaccgtccg
gctcgctcgtttgaccgcgacgagcggcccgcccgctcctacgaccgcggcgaccgtccc
tcccgctcgttcgaccaggacgcgcgtccctcgcgcagtcacggccgcggcgaccgcccg
actcgctcctacgaccgcgactcccggccctcgcgccgcgactccggctcggacttctac
cccagtcgcgacgcccgcacgccgcatcaggccgatgacgtcgtgctcgagcgcctcgag
gcgacggccacgctcgccgtcgatgtcgagggcgtcacgttcggcgacctcggtctgggc
ggcaacatcgtccggatgctgaccgagctgggagcggcgtcaccgttcccgatccaggcc
gcgaccattcccgaggtgctcgccggcaaagatgttctcggacgcggcaagactggctcc
ggcaaaacgatcgccttcggtgctcccgtcgtcgagcgactgatggagaacaacggagcc
aagggtcgcaagccgggccgtgctccgcgtgcgctcatcctggcgcccacccgtgaactc
gcgatgcagatcgaccgcacgatccagccgatcgcccgctcggtcggactgttcacgacg
accatctacggaggcgtcccccagtacaagcaggtgggcgcgctccagcgcggggtcgac
atcgtcatcgcgacgccgggccgcctcgaggacctcgtcgagcagggccgactcgacctt
tcgaacatcaccatcacggtgctcgacgaggccgaccacatgtgcgacctgggcttcctc
gagccagtgcagcggatcctccgccagaccatcgacggcggccagcgcctgctgttctct
gccacgctcgacaagggcgtcgcgacgctcgtcgacgagttcctggtcgatccgagcgtc
cacgaggtcgccggcgaggaccaagcctcctcaagcatcgaccaccgcgtgctcctgatc
gagcaccgggacaaggccgagataatcgagcagctcgccgcccgcgacggcaagacgctg
atcttcactcgcacccgggccttcgcggagcagctcgccgagcagctcgaccacgcggat
atccccgcgaccagcctgcacggcgacctcaaccagtcccgccgcacgcgcaacctcgct
ctgctgaccagcgggcgcgtggacgtgctcgtcgcgaccgacgtcgccgctcgcggtatc
cacgtcgacgacatcgacctggtgatccaggccgatgcccccgatgagtacaagacgtac
ctgcaccgctccggccgcaccggccgcgcgggcaagaagggcacagtcgtcactctcatc
acccgcaaccgccgtcgtcgcatggaggagctgctcgaccgcgccgagatcgaggccgag
atggttgacgcccgccccggcgaccgcatcctccgcgagatcagcgcagctgctgagtag
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