Rathayibacter rathayi: C1O28_02335
Help
Entry
C1O28_02335 CDS
T05845
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00260
Glycine, serine and threonine metabolism
rry00460
Cyanoamino acid metabolism
rry00630
Glyoxylate and dicarboxylate metabolism
rry00670
One carbon pool by folate
rry00680
Methane metabolism
rry01100
Metabolic pathways
rry01110
Biosynthesis of secondary metabolites
rry01120
Microbial metabolism in diverse environments
rry01200
Carbon metabolism
rry01230
Biosynthesis of amino acids
rry01240
Biosynthesis of cofactors
rry04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C1O28_02335
09102 Energy metabolism
00680 Methane metabolism
C1O28_02335
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C1O28_02335
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C1O28_02335
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C1O28_02335
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C1O28_02335
Enzymes [BR:
rry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C1O28_02335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AZZ48181
UniProt:
A0ABD6W8R9
LinkDB
All DBs
Position
470678..471973
Genome browser
AA seq
431 aa
AA seq
DB search
MSSSPSSAHPGVAALFDAPVSVVDPEIAIVLQQELDRQRSYLEMIASENFVPRAILESQG
SVLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKALFGAEFANVQPHSGASANAAALAA
LVQPGDTILGLELAHGGHLTHGMKLNFSGKLYNATAYGVDPTSFRIDMDAVREKALEVRP
QVLIAGWSAYPRQLDFEAFRAIADEVGAKLWVDMAHFAGLVAAGLHPSPVPFADVVTTTV
HKTLAGPRSGLILAKQEYAKKVNSAVFPGQQGGPLMHVIAAKATAFKLAGEAEFADRQAR
TIRGAQILAERLTAADSKAEGIDVLTGGTDVHLVLADLRDSPLDGKQAEDRLHEVGITVN
RNAVPFDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADVIAEALKPSADLEALRDRVAR
LTDDFPLYPGL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcatccccttcctccgcgcaccccggcgtcgccgccttgttcgacgcgcccgtc
tcggtggtcgaccccgagatcgccatcgtgcttcagcaggagctcgatcgccagcgcagc
tacctcgagatgatcgcgagcgagaacttcgttccgcgagcgatcctcgaatctcagggc
tccgtcttgaccaataagtacgccgagggctaccccggtcgtcgttactacggcggttgc
gagttcgtcgatgtcgccgagcagctcgcgatcgaccgggccaaagcgctcttcggcgcc
gagttcgccaacgtccagccccactccggcgcgtccgccaacgcggcggcactcgccgct
ctggtgcagcccggcgacaccatcctcggcctcgagctggcccacggcggacacctgacc
cacggcatgaagctcaacttctcgggcaagctctacaacgcgaccgcgtacggcgtcgac
ccgacgagcttccggatcgacatggacgctgttcgcgagaaggccctggaggtccgcccg
caggtgctcatcgctggctggtccgcctacccgcgccagctcgacttcgaggcgttccgc
gccatcgcggacgaggtaggcgcgaagctctgggttgatatggcccacttcgccggcctg
gtggccgccggcctgcacccctccccggtgcccttcgccgacgtcgtgacgaccaccgtc
cacaagacgctggcgggcccgcgctcaggcctcatccttgccaagcaggagtacgccaag
aaggtgaactcggccgtgttccctggtcagcagggcggtccgctgatgcatgtgatcgca
gcgaaggcgactgcgttcaagctcgccggcgaagccgagttcgccgaccgccaggcgcgt
accatccgcggtgcgcagatcctcgccgagcgcctcaccgccgccgactcgaaggccgag
ggcatcgacgtgctcaccggaggcaccgacgtgcacctcgtgctcgccgacctgcgcgac
tcgcccctggacggcaagcaggccgaggaccgcctgcacgaggtcggcatcacggtcaac
cgcaatgccgtccccttcgatccgcgcccgccgatggtcacctcgggtctgcgcatcggc
accccggcgctcgcgacccgcggcttcggcgacaccgaattcaccgaggtcgccgacgtc
atcgccgaggcgctgaagccctcggccgatctcgaggcgctgcgcgatcgtgtcgcccgc
ctcaccgacgacttcccgctctaccccgggctgtag
DBGET
integrated database retrieval system