Rathayibacter rathayi: C1O28_03140
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Entry
C1O28_03140 CDS
T05845
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
rry
Rathayibacter rathayi
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rry03000
]
C1O28_03140
Transcription factors [BR:
rry03000
]
Prokaryotic type
Helix-turn-helix
XRE family
C1O28_03140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
HTH_19
HTH_26
Peptidase_M78
HTH_25
HVO_2718
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AZZ48321
LinkDB
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Position
623357..624817
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AA seq
486 aa
AA seq
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MTDPSTPAVGSDAALLGQRLRHFRTRRGLTLGQLAERVDVSGSQLSLIETGRREPRLSLL
QRLAAALGVELAALLSDEPPSERAALEIELARVQKGSLYRSLGLPEFKVNKGLTTPVLEA
FLGVYRELARRRSEASATPEEARRANTAQRLQLSERNSYLPEIEEVAGEMLRTVGHRGGA
LTHSSVSKMARHLGFEIIHVGDLPHSARSVIDLANGRIYLPPASIPGGHGLRALALQAMA
HRLLGHERPMTYADFLRQRLEINYFAAACLMPLEPAVAFLQEAKRERDISVEDFRDGFGV
THEAAALRFTNLLTSHFDIRMHFLRVLGDGSIQKAYENDGLPLPTDVTGAVEGQVVCRYW
SARSAFTRTNRTTEYYQYVDTPAGTFWSASQTGTTATEEFSITVGVPFAEARFFRGRDTD
RRELSRCPDESCCRRPPSDLAARWDGNAWPSARLHAHVLAPLPSGTFPGIDDAEVYEFLD
THAREP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatccctcaacccccgccgtcggctccgacgccgcgctgctcgggcagcgcctg
cgtcacttccgcacccgccgcggactcaccctcgggcagctcgccgagcgggtggacgtc
tcggggagccagttgtcgctgatcgagaccggccgacgcgagccgcggctctccctcctc
cagcgcctcgccgccgcgctcggcgtcgagctggcggccctgctctctgacgagccgccg
agcgagcgggccgcgctcgaaatcgagctcgcccgggtgcagaagggctcgctgtaccgc
tcgctcggcctcccggagttcaaggtcaataaggggctgaccactccggtgttggaggcg
ttcctcggcgtctaccgcgaactcgcccgccgtcgcagcgaggcgagcgccaccccggag
gaggcgcgccgggcgaatacggctcagcggctccagctgagcgagcgcaactcctacctg
cccgagatcgaggaggtggcgggagagatgctgcgcaccgtcggccaccgcgggggagcg
ctgacccacagctccgtctcgaagatggcgcggcacctcggattcgagatcatccacgtc
ggcgatttgccgcactcggcccgctccgtgatcgacctcgcgaacggtcggatctacctc
ccgcccgcctcgatccccggcgggcacggcttgcgggcgctcgcgctgcaggcgatggcg
catcgcctcctcggccatgagcgccccatgacctacgccgacttcctccgccagcgtctc
gaaatcaactacttcgccgccgcctgcctgatgccgctggagccggccgtcgcgttcctg
caggaggccaagcgggagcgcgacatctccgtcgaggacttccgcgacggcttcggcgtc
acccatgaggccgccgccctgcgcttcaccaacctgctcacctcccacttcgacatccgg
atgcacttcctgcgggtcctcggcgacggctcgatccagaaggcgtacgagaacgacggg
ctcccgctgccgacggatgtgaccggagctgtcgagggccaggtcgtctgccgctactgg
tcggcgcgctcggcgttcacccgcaccaaccggaccaccgagtactaccagtacgtcgat
acacccgccggcacgttctggtcggcgtcgcagaccggtacgaccgcgacggaggagttc
tcgatcaccgtgggcgtcccgttcgccgaggcccgcttcttccgcggccgcgacaccgac
cgccgtgaactctcccgctgccccgatgaatcctgctgccggcgcccaccgtccgatctc
gccgcgcgctgggacggcaacgcttggcccagcgcccgcctgcacgcgcacgtcctcgcg
cccctgccctcgggcaccttccccggcatcgacgacgccgaggtctacgagttcctcgac
acccacgcccgcgagccctaa
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