Rathayibacter rathayi: C1O28_04215
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Entry
C1O28_04215 CDS
T05845
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00300
Lysine biosynthesis
rry00470
D-Amino acid metabolism
rry01100
Metabolic pathways
rry01110
Biosynthesis of secondary metabolites
rry01120
Microbial metabolism in diverse environments
rry01230
Biosynthesis of amino acids
Module
rry_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C1O28_04215
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C1O28_04215
Enzymes [BR:
rry01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C1O28_04215
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Chap-C
Motif
Other DBs
NCBI-ProteinID:
AZZ48500
UniProt:
A0ABD6W9X6
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Position
844647..845528
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AA seq
293 aa
AA seq
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MTIELHFTKGQGTGNDFVLYSDPDGEVDLSPAQVAMICDRHFGVGADGVIRAVRSRAIPE
GAASLAEESEAEWFMDYRNADGSIAEMCGNGIRVYAAFLLAAGLAALEPGDTLPIGTRAG
VRDVTRSGAGFQVDLGRWELAGGEPLVRAKELSVARPGLGLDLGNPHVVVALSNDEELES
ADLSYIPHLDPEPTVGANVEFVVPGEPLVHDGIGRIRMRVHERGSGETLSCGTGAAAAAL
AVRHWAGARAPQSWRVEVPGGTLGVTMFAAEEGEHVGLSGPAHLVFTGTIRLD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgagctgcacttcaccaagggccagggcacgggcaacgacttcgtgctctac
agcgacccggacggtgaggtggacctctcgcccgctcaggtcgcgatgatctgcgaccgg
cacttcggcgtcggggccgacggtgttatccgggcggtccgctccagggcgatcccggag
ggtgctgcctcactcgccgaggagagcgaggcggagtggttcatggactaccgcaacgct
gacggctcgatcgcggagatgtgcggcaacggcatccgcgtctacgcggcgttcctgctc
gccgccggactcgccgcgctcgagcccggtgacaccctcccgatcggcacccgcgcggga
gtgcgcgacgtgacgcggagcggtgctggcttccaggtcgacctcggccgctgggagctg
gcgggcggcgagccactggtgcgggctaaggagctgagcgtcgcgcggcccggactcgga
ctcgacctcggcaacccgcacgtcgtcgtcgcgctgagcaacgacgaggaactcgagtcc
gccgatctctcctacatccctcacctcgacccggagccgaccgtcggggcgaacgtcgag
ttcgtcgtgcccggcgagcccctcgttcacgacggtatcggtcggattcggatgcgcgtg
cacgagcgcggcagcggtgagaccctcagctgcggcactggcgcggccgcggcagccctg
gcggtacgtcactgggcgggagcccgcgccccgcagtcgtggcgcgtcgaggtgccgggg
ggcacgctcggcgtgaccatgttcgcggcggaggagggcgagcacgtcggactctccggt
ccggcccacctggtcttcaccggtaccatccggctcgactga
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