Rathayibacter rathayi: C1O28_04795
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Entry
C1O28_04795 CDS
T05845
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00061
Fatty acid biosynthesis
rry00071
Fatty acid degradation
rry01100
Metabolic pathways
rry01212
Fatty acid metabolism
rry02024
Quorum sensing
rry04146
Peroxisome
Module
rry_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C1O28_04795
00071 Fatty acid degradation
C1O28_04795
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C1O28_04795
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1O28_04795
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rry01004
]
C1O28_04795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rry04147
]
C1O28_04795
Enzymes [BR:
rry01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C1O28_04795
Lipid biosynthesis proteins [BR:
rry01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C1O28_04795
Exosome [BR:
rry04147
]
Exosomal proteins
Exosomal proteins of breast milk
C1O28_04795
Exosomal proteins of breast cancer cells
C1O28_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AraC_N
Motif
Other DBs
NCBI-ProteinID:
AZZ48594
LinkDB
All DBs
Position
complement(971011..972834)
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AA seq
607 aa
AA seq
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MDQFDSPLVVAADPQANATALLLDRVRETPERPLFALPDGGGWRDITAREFLDQVTALAK
GFVAVGLEPGEKVGLICKTRYEWTLIDFAVWFAGGVLVPVYETSSPAQVQWNLADSGAHA
VIVETAEHFARFDEVRADLPEVRLAWQIGLGDLDKLVARGVDVPDAEIERRRSLAIGADI
ATIIYTSGSTGRPRGCIIRHSNFVELSRNSAVALTELIHQPGASTLLFITTAHVFARFIA
ILCVHGGVKVGHQADTKQLLPSLASFKPTFLLAVPRVFEKVYNSAEQKAEAAGRGKIFRR
AADVAVAHSMAVEAGSVPFALRLQFLLFDRLVYSKLRAAMGGSVRFAVSGSAPLGDRLGH
FFHSLGIKILEGYGLTETTAPATVNRTERFKIGSVGPAMPGVSVRIADDGEIQVRGIDVF
GGYWNNEAATAESFDGEWFRTGDLGALDEDGYLRVTGRKKEIIVTAGGKNVAPAALEDPI
RANPLVGQVVVVGDQRPFIAALVTLDSEMLPTWLANNGQDAGLSLDAAAVNPAVLAEVQR
AVDAANERVSRAESVRKFVILPTEFTEASGHLTPKMSIKRNVILADFAGTIAAVYSAAPA
TEGISLR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagttcgattcccctctggtggtggcggccgatccgcaggccaacgcgaccgca
ctcctcctcgaccgcgtgcgcgagacgcccgaaaggccgctcttcgcgctgcccgacggt
ggcggctggcgcgacatcacggcgcgggagttcctcgatcaggtcaccgcgctcgccaag
gggttcgtcgccgtcggtcttgagccgggcgagaaggtcgggctgatctgcaagacccgt
tacgagtggacgctgatcgacttcgccgtctggttcgccggcggcgtcctcgttcccgtg
tacgagacctcctcccccgcccaggtgcagtggaacctcgccgactccggcgcacacgcc
gtgatcgtcgagaccgccgagcacttcgcccgcttcgatgaagtccgcgccgacctgccg
gaggtgcgcctcgcctggcaaatcggactcggcgacctcgacaagctcgtcgcgcgcggc
gtcgatgtcccggatgccgagatcgagcgccgccgctcgctggccatcggtgccgacatc
gcgacgatcatctacacctccggctccaccgggcggcccaggggctgcatcatccggcac
tcgaacttcgtcgagctcagccgcaactcggccgtggcgttgacggaactgatccatcag
cccggcgcgtcgacgctgctgttcatcaccaccgcgcatgtgttcgcgcgcttcatcgcg
atcctctgcgtgcacggcggggtgaaagtcgggcaccaggccgacaccaagcagctgctc
ccctcgctcgcctcgttcaagccgaccttcctcctggctgtccctcgcgtgttcgagaag
gtgtacaactccgccgagcagaaggccgaggccgcgggacgggggaagatcttccgccgc
gccgccgatgtcgcggtcgctcattcgatggcggtcgaggcgggctcggtgccgtttgcg
ctgaggctgcagttcctgctgttcgaccgactcgtctactcgaagctgcgggccgcgatg
ggcggcagtgtgcgcttcgccgtgtccggttccgcgccgctgggcgaccggctcgggcac
ttcttccacagcctcggcatcaagatcctcgagggctacggcctcaccgagacgacggcg
cccgccacggtgaaccgcacggagcggttcaagatcggctcggtcggtccggcgatgccg
ggcgtctcggtgcgcattgcggacgatggggagatccaggtgcgcgggatcgacgtcttc
ggcggctactggaacaacgaagcggccacggcggagtcgttcgacggcgagtggttccgg
acgggcgatctcggagcgctcgatgaggacggctacctgcgggtcacgggtcggaagaaa
gagatcatcgtgacggcgggcggcaagaatgtggcgccggctgcgctcgaggatccgatt
cgggcgaatccgctggtcgggcaggtcgttgtcgtgggtgatcagcgtccgttcatcgcc
gcgctggtcacgctcgactccgagatgctgcccacctggctggcgaataacgggcaggat
gcaggtctgtcgctcgacgctgcggccgtgaatcctgctgtgctggctgaggtgcagcgg
gccgttgatgcggcgaacgagcgggtgtcccgtgcggagtcggtccggaaattcgtgatc
ctgccgaccgagttcaccgaggccagcggtcacctgactccgaagatgagcatcaagcga
aacgtcatcctcgccgatttcgccggcaccatcgccgccgtctactccgccgctcccgcc
accgagggcatctccctccgctga
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