Rathayibacter rathayi: C1O28_05365
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Entry
C1O28_05365 CDS
T05845
Name
(GenBank) preprotein translocase subunit SecA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rry
Rathayibacter rathayi
Pathway
rry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C1O28_05365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rry03400
]
C1O28_05365
Enzymes [BR:
rry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1O28_05365
DNA repair and recombination proteins [BR:
rry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1O28_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Arg_repressor_C
Motif
Other DBs
NCBI-ProteinID:
AZZ48689
LinkDB
All DBs
Position
1101511..1103475
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AA seq
654 aa
AA seq
DB search
MASSGAVARVLLDSPLPQLDRLLDYAVPEALRGQVVPGVRVRVPLRTGGRIADALVVETG
EGSEHVGALSEVEELVSPLVVLTPEVWALARRVADRACGGASDVLRLAVPRRHVRVERAR
LAAGPAPTAPAVEAGGVTGYPVDSFVGLAEGARLAVGAVPTPVQLDSGAWVGGWAVTLAE
LARDTLAAGHDAILAVPDYRDQEQLELALAAHLPAESLVRLDARQKGAERYAAFVRCLDP
GPRVVVGNRSVLYAPSSALGLIALWDDGDPLFAEPLAPYAHARDVALVRQEQSGAGLVLL
GNTRTVEVERLVEIGFAAEVEPRPSRRPHVVPTAQQWAADEHDAAARIPSSAWREARKAL
DSGPVLVQVARPGYAPVVACARCRTVARCNRCQGPLGVHSAGGRPSCGWCGLIAADWTCS
VCEATALRLVTLGAGRTAEELGRAFPGAKVIVADGQRPVLTLPAEPALVVATRGAEPRAD
GGYHAVLLLDGERMLARESLRVADDALRTWSNAAALARPGAPVLLVGVGGRLATALATWR
QAEYLRAELLERRALRFPPAVRLATVSGDAHAVAEALDALDEEDRQEVLGPVGLEDGSVR
AIVRFDYARGAEVAARLRSAVIRNATRRRRPPTTPGRFRPAPKLRVRLDDPDIL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcggagccgtcgcgcgcgtgctcctggactcgccactcccgcagctcgac
cggctcctggactacgcggtgccggaagctctgcgcgggcaggtcgtgcccggcgtgcgc
gtgcgggtgccgctgcgcaccggcgggcggatcgcggacgccctcgtcgtcgagacgggg
gagggatccgagcacgtcggcgcgctgagcgaggtcgaggagttggtgtcgccgctcgtg
gtgctgacgcctgaggtctgggcgctcgcgcgccgcgtcgcggatcgcgcctgcggggga
gccagcgatgtgctgcgtctggccgtacctcgtcgccatgtgcgagtcgagagggcgcgt
ctcgcggccggtccggctccgacggctcccgcggtcgaggcgggcggagtgacgggttat
cccgtcgactccttcgtcggcctcgctgagggcgcgcgtctggcagtcggcgccgtgccg
actcccgtgcagctcgactccggtgcgtgggtcggcggctgggcagtcacgctggccgag
ctcgcccgggacacgctcgccgcgggccacgacgcgatcctggcggtgcccgactaccgc
gatcaggagcagctggaactcgccctcgccgcccacctcccggcggagtcgctcgtgcgg
ctcgacgcgcggcagaagggcgccgagcgctacgccgccttcgtgcgctgcctcgatccc
gggccgcgggtcgtcgtcggcaaccgctccgtgctctacgccccctcctccgccctcgga
ctgatcgcgctctgggacgacggcgacccgctcttcgctgagcccctggcgccctacgcg
cacgcccgtgacgtcgccctggtccggcaggagcagagcggagccggccttgtgctgctg
ggcaacacccgcaccgtcgaggtcgagcgtctggtcgagatcggcttcgcggccgaggtg
gagccgcgcccgagccgccgcccgcatgtggtgccgaccgcccagcagtgggccgccgac
gagcacgacgccgcggcgcgcatcccctcctccgcctggcgagaggcgcggaaggccctc
gactccggccccgtgctggtgcaggtcgcacgtcccggctacgcaccggtggttgcctgc
gcccgctgccggacggttgcgcgctgcaaccgctgccagggtccgctcggcgtgcactcc
gcgggtgggcgtccgagctgcggctggtgcggcctgatcgcggcggactggacctgctcg
gtctgcgaggcgacggccctccgcctggtcaccctcggggccgggcgcaccgcggaggag
ctggggcgcgccttccccggcgccaaggtgatcgtcgccgacggccagcggccggtgctg
accctccccgcggagcccgcgctcgtcgtggccacccgcggcgcggagccgcgggccgac
ggcggctaccatgccgtcctcctgctcgacggcgagcggatgctggcgcgcgagagcctg
cgcgtcgccgatgatgcactgcgcacctggtcgaacgccgctgccctggcccgcccgggc
gctccggtgctgctggtcggggtcggcggtcgcctcgcgaccgccctcgcgacctggcgg
caggccgagtacctccgcgccgagctgctggagcggcgcgcgctgcgcttcccgcccgcg
gtgcggctcgcgacggtcagcggcgacgcacacgcggtagcggaggcgctggacgcgctc
gacgaggaagaccggcaggaggtgctcggaccggtcggactcgaggacggctccgtccgg
gccatcgtgcgcttcgactacgctcgcggtgcggaggtggccgcccgcctccgctccgcc
gtgatccgcaatgccacgcgccgccgtcggccgccgactacgcccggccgcttccggccg
gccccgaagctccgggtccgcctcgacgaccccgacatcctctga
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