Rathayibacter rathayi: C1O28_06075
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Entry
C1O28_06075 CDS
T05845
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rry
Rathayibacter rathayi
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rry03032
]
C1O28_06075
03400 DNA repair and recombination proteins [BR:
rry03400
]
C1O28_06075
Enzymes [BR:
rry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C1O28_06075
DNA replication proteins [BR:
rry03032
]
Prokaryotic type
DNA Topoisomerases
C1O28_06075
DNA repair and recombination proteins [BR:
rry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1O28_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AZZ48812
UniProt:
A0ABD6WAP2
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All DBs
Position
1258141..1260609
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AA seq
822 aa
AA seq
DB search
MNAAAPSSGSSLTERIEDVDVSAEMEGSFLEYAYSVIYSRALPDARDGLKPVQRRILYMM
SEMGLRPDHGHVKSARVVGEVMGKLHPHGDASIYDSLVRLAQPFTMRVALVDGHGNFGSL
DDGPAASRYTEARLAPAATAMTEHLGEDVVDFVPNYDNSHDQPEVLPSAFPNLLVNGASG
IAVGMATNMAPHNLVEVIGAARHLIAHPDASLEDLMSFVPGPDFPSGGTIVGLAGVRDAY
ATGRGSFKTRARVAVESITARKSGLVVTELPYLVGAEKVIDKIKDGVQNKKLSGISDVTD
LTDRDNGLRLVIGIKTGFSPEAVLEQLYRYTPLEDAFSINNVALVDGGPRTLGLKELLQV
YIGHRVQVVTRRSRYRLRKRQERLHLVEGLLIAILDIDEVIQLIRGSDDTAAARARLIEV
FDLSILQADYILELQLRRLTRFSRIELETERDTLLAEIAELEALLASRSRIDELVSDELD
EVAQRLGTPRRTLLTEARPSIATTGRKAAAVLEIADVPCRVLLSTTGRMVRVDRDPDAAP
HPERATRRSKHDAVLSVLDTTTRAEIGAVTSAGRLLRFSPVDVPVVPSSSVQLGAGVRMN
DYLSHLAKDERVLALVALDDARPIALGTQQGVVKRVASGELPNRPDIELIALKPKDTVVG
AAASAEEDELVFVTGEARLLRFSASAVRPQGRTAAGMVGVKLAETDDVVHFAVVAAEDRD
EAVVATVAVDSWALSGTDTGSAKVSPFSEFPAKGRATGGVRAQRFLKGETALGVAWVGPG
PAHALEADGSVAALPDSGMKRDGSGVALATPIVTIGAAPELF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcagccccttcctccggatcctcgctcaccgagcgcatcgaggacgtcgac
gtctcggccgagatggaggggtccttcctcgagtacgcctattcggtgatctattcgcgg
gcactccccgacgcccgggacggcctcaagccggtgcagcgccgcatcctctacatgatg
agcgagatgggtctgcgacccgatcacgggcacgtaaagtcggcccgcgtggtcggcgag
gtgatgggcaagctgcacccgcacggcgacgcctcgatctacgactccctggtgcgtctc
gcgcagccgttcaccatgcgggtggcgctcgtcgacggccacggcaatttcggctccctc
gacgacggtccggccgcatcgcgctacaccgaggcccgtctcgctccggccgccacggca
atgaccgagcacctcggcgaagacgtcgtcgacttcgtgcccaactacgacaactcgcac
gaccagcccgaggtcctcccctccgcgttcccgaacctgctggtcaacggcgcgagcggc
atcgccgtcggcatggcgaccaacatggctccgcacaatctcgtcgaggtgatcggggcg
gcgcggcacctgatcgcccaccctgatgcctccctcgaggacctgatgtcgttcgtcccc
gggcccgacttccccagcggagggacgatcgtcggcctcgccggcgtgcgcgacgcctat
gccaccggccgtggcagcttcaagacccgcgcccgcgtcgctgtcgagagcatcaccgcg
cgcaagtccggcctggtcgtcaccgagctgccctacctcgtcggcgccgagaaggtgatc
gacaagatcaaggacggcgtgcagaacaagaagctcagcggcatctcggacgtcaccgac
ctgacggatcgcgacaacggcctccgcctggtgattggcatcaagaccggattcagtccc
gaagccgtcctcgagcagctctaccgctacacgccgctcgaggacgcgttctcgatcaac
aacgtcgcgctggtcgacggcggaccgcgaacccttggtctcaaggagctgctgcaggtc
tacatcggccaccgcgtgcaggtcgtcacccgccgttcccgctaccgcctgcgcaagcgt
caggagcgactgcacctcgtcgagggcctcctgatcgcgatcctcgacatcgacgaggtg
atccagctgatccgtgggagcgacgacacggcggcggcccgcgcccggttgatcgaggtg
ttcgatctcagcatcctgcaggccgactacatcctcgaactccagctgcgccggctcacc
aggttctcgcgcatcgagctcgagaccgagcgcgacacccttctcgccgagatcgccgag
ctggaggcactgctcgccagtcgctcgcggatcgacgagctggtctcggacgaactcgac
gaggtcgcacagcgcctgggcaccccacgccggactctgctgaccgaggcgcgcccctcc
atcgccactaccgggcgtaaggccgcggctgtcctcgaaatcgccgatgtcccctgccgg
gtactcctcagcaccaccggccgcatggtgcgcgtcgatcgcgacccggacgcggcgccg
caccccgagcgcgccacccgccgctcgaagcacgacgcggtgctgagcgtgctcgacaca
acgacccgcgccgagatcggcgccgtcaccagcgccgggcgactgttgcgcttctccccc
gtggatgtgccggtcgtaccctcctcctccgtgcagctgggcgccggggtgcggatgaac
gactacctctcgcatctggcgaaggatgagcgcgtgctcgccctcgtcgctctcgacgac
gcgcggccgatcgcgctcggcacccagcagggcgtggtcaagcgcgtcgcgtcgggcgag
ctaccgaaccgtccggatatcgagctcatcgcgctgaagccgaaggacaccgtcgtcgga
gcggccgcctcggccgaggaggatgagctcgtcttcgtcaccggcgaggcgcggctcctg
cgcttctccgcgtcggccgtccgccctcagggccgcacagccgcgggcatggtcggagtg
aagctcgccgagaccgacgacgtcgtgcacttcgccgtcgtcgccgccgaggacagggac
gaggcggtcgtcgcgacggtcgccgtcgacagctgggcgctttcggggacggacaccggc
agcgcgaaggtgtcaccgttctccgagttccccgcgaagggccgagccaccggcggagtg
cgggctcagcggttcctcaagggcgagacggccctcggagtcgcctgggtcggccccggt
cccgcgcacgccctcgaggccgacggctctgtcgccgccctcccggactccggaatgaag
cgcgacggctccggagtcgccctcgcgaccccgatcgtgaccattggagcggcgcccgag
ctgttctga
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