Rathayibacter rathayi: C1O28_07975
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Entry
C1O28_07975 CDS
T05845
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rry
Rathayibacter rathayi
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rry03016
]
C1O28_07975
Enzymes [BR:
rry01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1O28_07975
Transfer RNA biogenesis [BR:
rry03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1O28_07975
Prokaryotic type
C1O28_07975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZZ49141
UniProt:
A0ABD6WCM2
LinkDB
All DBs
Position
complement(1640558..1641505)
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AA seq
315 aa
AA seq
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MLETPAPAPNGILLLDKPGGITSHDLVSRTRRRAGTRKVGHAGTLDPMATGLMILGLGPS
TRLLTYLVGLDKQYEATIRLGASTSTDDREGELLTSADSDLVAALTPEAVADGVAALTGA
IEQVPSTVSAIKVDGRRAYARARDGEEVILASRPVTVSTFDLLGSRRVATRDGEARLDLD
VRVTCSSGTYIRALARDLGAALAVGGHLRSLRRTVVGPFSVAQAGEIDELDVPAALLSPT
QVAGELFPLLRLDAQEAGDLANGKRIPAPEAVAGAKGLFAAVGPGERLIGLAERHGTQLK
SVVNFPTEDLRTVAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgagacccccgccccggctccgaacggcatcctcctgctggacaagcccggtggc
atcaccagccatgacctcgtctcgcggacccgacggcgcgcggggacccggaaggtcggc
cacgcgggcaccctcgatccgatggccaccgggctgatgatccttgggctcggcccctcg
acgcggctgctcacctacctggtcggcctcgacaagcagtacgaggcgaccatccggctc
ggcgcctcgaccagcacggatgaccgcgagggcgagctcctcacctcggccgactccgac
ctcgtcgcagctctcaccccggaggcggtggccgacggcgtcgcggccctcaccggagcg
atcgagcaggtcccgagtacggtcagcgcgatcaaggtggacggccggcgcgcctacgcc
cgcgcccgcgacggcgaggaggtcattctcgcctcccgcccggtgaccgtctcgaccttc
gacctgctggggagccgcagggttgcgacgcgggacggggaggcacgcctcgacctggac
gtgcgcgtcacctgctcctccggcacctacatccgtgcgctggcgcgggacctgggcgcg
gcgctcgcagtcggtggccatctgaggagcctccgtcgcaccgtcgtcggtccgttctcg
gtggcgcaggccggcgagatcgacgaactcgacgtccccgccgcactcctgtcgccgacg
caggtcgcgggcgagctgttcccgctgctccgcctcgatgcgcaggaggcgggcgacctc
gccaacggtaagcgcatcccggccccggaggcagtcgcgggcgcgaaggggctcttcgcc
gccgtcggcccgggggagcggctgatcggcctcgctgagcgccacggcactcagctcaag
agtgtcgtcaatttcccgaccgaggacctgcggacggtcgcgtcgtga
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