Rathayibacter rathayi: C1O28_08425
Help
Entry
C1O28_08425 CDS
T05845
Name
(GenBank) citrate (Si)-synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00020
Citrate cycle (TCA cycle)
rry00630
Glyoxylate and dicarboxylate metabolism
rry01100
Metabolic pathways
rry01110
Biosynthesis of secondary metabolites
rry01120
Microbial metabolism in diverse environments
rry01200
Carbon metabolism
rry01210
2-Oxocarboxylic acid metabolism
rry01230
Biosynthesis of amino acids
Module
rry_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C1O28_08425
00630 Glyoxylate and dicarboxylate metabolism
C1O28_08425
Enzymes [BR:
rry01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
C1O28_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
AZZ50470
LinkDB
All DBs
Position
complement(1739947..1741245)
Genome browser
AA seq
432 aa
AA seq
DB search
MPGAQQLPEKVTLTFGDQTADFPVLRSVDGSSSIDFSTLSKQTGFMSLDYGFVNTAATKS
QITYIDGDQGILRYRGYPIEEVATNATCLEVAWLLIYGELPTADELAGFDERIRRHTLLH
EDLKRFFDALPHSAHPMSVLSAGVSALSTYYEDSSNPKDPEAVELSTIRLLAKLPVMAAY
AHKKSIGQAFLYPDNSLSFVDNFLRLNFGTMAEQYQVDPVLSKALDRLLILHEDHEQNAS
TSTVRLVGSTEANLYASISAGINALFGPLHGGANEAVLTMLGRIRESGESVSTFVERVKN
KEEGVRLMGFGHRVYKNYDPRAKLVKESASEVLQSLGVKDPLLDIAMELEALALEDDYFK
ERRLYPNVDFYTGVIYKAMGFPTRMFTVLFAIGRLPGWVAHWREMNIDKQTKIGRPQQLY
MGSPGRHWPTDR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggggcgcagcagctccccgagaaggtcaccctcaccttcggcgaccagaccgca
gatttcccggtcctgcgcagcgtcgacggctcctccagcattgatttctcgacgctgtcg
aagcagaccggattcatgtcgctcgattacggcttcgtcaacacggcggcgaccaagtcg
cagatcacgtacatcgacggcgaccaggggatcctgcgataccgcggctaccccatcgaa
gaggtcgccaccaacgcgacatgccttgaggtggcctggcttcttatctacggtgagctg
ccgaccgccgacgaactcgcgggcttcgatgagcggatccgccgccacacgttgctacac
gaggatctcaagcgcttcttcgatgcgctcccgcacagtgcgcacccgatgtcggttctc
tcggccggagtctccgcgctgtccacctactacgaggacagctccaatccgaaggatccc
gaggcggtcgagctgtccaccattcggctgctcgcgaagctgccggtcatggcggcctat
gcgcacaagaagagcatcggccaggcgttcctctatccggacaactcgctgagtttcgtc
gacaactttctccggttgaatttcggcacgatggccgagcagtaccaggtcgatccggtg
ctctcgaaagctcttgatcgcctcctgatcctgcatgaggatcacgagcagaacgcttcg
acctcgaccgtccgtctcgtcggttcgacggaggcgaacctctacgcctccatctcggcc
ggcatcaacgccctcttcggtcccctgcacggcggagcgaatgaggctgtgctgaccatg
ctcggccggatccgcgagtcgggcgagagcgtgtcgaccttcgtcgagcgggtgaagaac
aaggaggagggcgtgcgcctgatgggctttggccaccgggtctataagaactacgacccg
cgcgccaagctcgtcaaggagagcgcatccgaagtgctccagtcgctcggagtgaaggac
ccgctgctcgacatcgcgatggaactcgaggccctcgcgctcgaggacgactacttcaag
gagcgtcgcctctacccgaacgtcgacttctataccggcgtgatttacaaggcgatgggc
tttccgacccgtatgttcaccgtgctcttcgcgatcggtcgcctgcccggctgggttgcg
cactggcgcgagatgaacatcgacaagcagaccaagatcggccgcccccagcagctgtac
atgggatcgcccgggcgccactggcccaccgaccgctga
DBGET
integrated database retrieval system