Rathayibacter rathayi: C1O28_08590
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Entry
C1O28_08590 CDS
T05845
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rry
Rathayibacter rathayi
Pathway
rry03030
DNA replication
rry03430
Mismatch repair
rry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1O28_08590
03430 Mismatch repair
C1O28_08590
03440 Homologous recombination
C1O28_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rry03032
]
C1O28_08590
03400 DNA repair and recombination proteins [BR:
rry03400
]
C1O28_08590
Enzymes [BR:
rry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1O28_08590
DNA replication proteins [BR:
rry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1O28_08590
DNA repair and recombination proteins [BR:
rry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1O28_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZZ49252
LinkDB
All DBs
Position
1782586..1783173
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AA seq
195 aa
AA seq
DB search
MPIDFTAIDFETANSHGASACSVGLVKVRDGRVVDRAGWLIRPPVGFDDFLEWNTRIHGI
RKHDVHAAATWVEQFADLTAFAGEDVFVAHNAGFDMSVIRAACAATALKHPEYDYLCSLQ
LARKTYELDSYRLPVVAMAAGFEDFRHHDASADAEACAAIVVHAARRHGAASMAELGELA
GVSVKRLLPKAPVAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgacttcaccgccatcgacttcgagaccgccaactcgcacggagcctccgcc
tgctccgtcgggctcgtgaaggtccgcgacggccgcgtcgtcgatcgggccggctggctg
atccgccctccggtgggcttcgacgacttcctcgagtggaacacgcggattcacggcatc
cgcaagcacgacgtgcacgcggccgcgacctgggtcgagcagttcgccgacctgacggcc
ttcgcgggcgaggacgtgttcgtcgcgcacaacgccggcttcgacatgagcgtcatccgt
gcggcctgcgcggccaccgccctcaagcaccccgagtacgactacctctgctcgctccag
ctcgcccgcaagacctatgaactcgactcctaccgcctccccgtcgtcgcgatggccgcg
ggtttcgaggacttccgacaccatgacgcatcagcagacgcggaagcgtgcgccgcgatc
gtcgtgcacgcggcacgacggcacggcgccgcgagcatggccgagctgggcgagctagcg
ggcgtctcggtgaagcgtctgctccccaaggctcccgtcgccgcctga
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