Rathayibacter rathayi: C1O28_09375
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Entry
C1O28_09375 CDS
T05845
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00020
Citrate cycle (TCA cycle)
rry00190
Oxidative phosphorylation
rry00650
Butanoate metabolism
rry00720
Other carbon fixation pathways
rry01100
Metabolic pathways
rry01110
Biosynthesis of secondary metabolites
rry01120
Microbial metabolism in diverse environments
rry01200
Carbon metabolism
Module
rry_M00149
Succinate dehydrogenase, prokaryotes
rry_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C1O28_09375
00650 Butanoate metabolism
C1O28_09375
09102 Energy metabolism
00190 Oxidative phosphorylation
C1O28_09375
00720 Other carbon fixation pathways
C1O28_09375
Enzymes [BR:
rry01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
C1O28_09375
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
Pyr_redox_2
HI0933_like
DAO
Motif
Other DBs
NCBI-ProteinID:
AZZ49381
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Position
1962384..1964219
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AA seq
611 aa
AA seq
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MSTPGHSHTGADQSAFAQTVGPDGVHYHQFDVVIVGAGGAGMRAAIEAGPKAKTAVISKL
YPTRSHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDL
ENMGLPFNRTEEGKIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQTLFQNCVRLGIN
FYNEFYVLDLVMTKIDGVDKPSGVVAYELATGELHVFQAKAIIFATGGFGKIYKTTSNAH
TLTGDGVGIIWRKGLPLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNASGERFMERY
APTIKDLAPRDIVARCMVQEVAEGRGAGPHKDYVLLDCTHLGAEVLETKLPDITEFARTY
LGVDPVVEPVPVMPTAHYAMGGIPTNVKAEVLSDNTTVVPGLYAAGECACVSVHGSNRLG
TNSLLDINVFGKRSGNNAADYSTTVDFTPLPADPAGAIRDMLASLRSATGTERIASIRKE
LQDEMDKNAQVFRTDESLEAVTGTIQRLRDRFRNISVQDKGKRFNTDLLEAVELGFLLDL
AEVVVYSARNRKESRGGHMRDDFPQRDDENYMQHTMAYLSGDAHSSDAGDHIRLDWKPVV
ITRYQPMERKY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaccaggccactcccacaccggcgccgaccagagcgccttcgcgcagaccgtc
ggacctgacggcgtgcactaccaccagttcgacgtggtgatcgtcggtgccggcggcgcc
gggatgcgtgcggccatcgaggccggcccgaaggcgaagacggcggtgatctcgaagcta
taccccacccgctcccacaccggagcggcgcagggcggcatggccgcggctctcgcgaac
gtcgaggaggacagctgggagtggcacaccttcgacaccgtcaagggcggcgactacctc
gtcgaccaagacgcggcggagatcctcgcgaaggaagccatcgacgcggtcatcgacctc
gagaacatgggcctgccctttaaccgcaccgaagagggcaagatcgaccagcgccgcttc
ggcgggcacacccgcgaccacggcaaggcgcccgtgcgccgggcctgctacgcggccgac
cgcaccggccacatgatcttgcagacgctgttccagaactgcgttcggctcggcatcaac
ttctacaacgagttctacgtgctcgaccttgtgatgacgaagatcgacggcgtggacaag
ccgtctggagtcgtcgcctacgagctcgcgacgggtgagctgcacgtcttccaggcgaag
gcgatcatcttcgcgaccggcggcttcggcaagatctacaagaccacctccaatgcgcac
accctcaccggcgacggcgtcggcatcatctggcgcaagggcctgccgctggaggacatg
gagttcttccagttccacccgactggcctggccggcctcggcatcctcctcacagagggg
gcgcgaggcgagggagcgatcctccgcaatgcctcgggtgagcgcttcatggagcgctac
gcccccaccatcaaggacctggcaccgcgcgacatcgttgcccgctgcatggtccaggag
gtggcggagggccgcggtgccggcccgcacaaggactacgtgctgctggactgcacccac
ctgggcgccgaggtgctcgagactaagctccccgacatcaccgagttcgcccgcacctac
ctcggcgtcgacccggtggtcgagccggtcccggtgatgccgaccgcgcactatgcgatg
ggcggcattccgaccaacgtgaaggcggaggtgctctcggacaacaccacagtcgtcccc
ggcctttacgccgccggtgagtgcgcctgcgtctcggtgcacggctccaatcgcctcggc
accaactcgctgctcgacatcaacgtcttcggcaagcgcagcggcaacaacgccgcggac
tactccacaaccgtcgacttcactcccctacccgccgatccggccggcgccattcgggac
atgctcgcctcgctccgctccgcgaccggcaccgagcggatcgcctcgatccgcaaggag
ctgcaggacgagatggataagaacgcgcaggtgttccgcacggacgaatccctcgaggcc
gtcaccgggaccatccagcgcctgcgcgaccgcttccgcaacatctcggtgcaggacaag
ggcaagcgcttcaacaccgatctcctcgaggccgtcgagctgggcttcctgctcgatctg
gccgaggtcgtggtctattcggcgcgcaaccgcaaggagagccgcggcggtcacatgcgc
gacgacttcccccagcgtgatgacgagaattacatgcagcacacgatggcgtacctctcc
ggtgacgcccactcctccgacgccggtgaccacatccggctcgactggaaacccgtcgtg
atcacccggtaccagccgatggagaggaagtactag
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