Rathayibacter rathayi: C1O28_10905
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Entry
C1O28_10905 CDS
T05845
Name
(GenBank) helicase
Organism
rry
Rathayibacter rathayi
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
AZZ49630
UniProt:
A0ABD6W5P9
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Position
complement(2281891..2285313)
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AA seq
1140 aa
AA seq
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MARQSPPGEVLPSAAPGSVTAGHEPFWEQDIRALVGSAAFGKGAAYADEGRVRELQWFGG
RTRLFGQVRGSGRLPYAVSVQLRDEGDHWSLLGGACSCPVKRECKHVAAVLIEALRRERE
GGVAGPFPGEAAVDAVPEWRSALAPLLAGAERSRTGIPLGLQFELLPGEPVRRPPGRYNS
YRPPPEPRPRLGVRPVRMGDRDRWVRTGASWRDLGYLHYSHDYDERQIDVIREMQGLLSG
HSASSYYSPDTWLYLDQCRSEAIWAALHGAVRAGIGLVMGDRDQTPLKILDTTATASIDV
TRTPAGLELRSLVAIGDHPAPEEFGFIGDPAVGLYTWEGGEELRARPVTLIPFAAPLLSS
ARTFLWSREAIRIPVAEESAFLTEHYQRLHRLFDIVSRDGSFEAPAVPEPRLGLTLEHTE
GAGLRGSWWWRYAVEGARGVDAERLPLRVGEDAGYRDLDAEQRILDSLVGAGLDPESTPA
LVSPSSRRLRPTFDLRGMQTVGFLTGEVERLRELGTVEIEEVGERVDYREAQTAPVVAVQ
TVAQPDSRDWFNLEISVTVNDEAVPLAEIFLALARGDEYMVLPSGVYFALDDERFGRLRE
LIAEARELSDDPGETLRISRFQSSLWDELVELGVVEAQAAAWRRAVEGLSGFTATGALES
RVLPEGFAVELRPYQQLGYDWLSFLYDNQLGGVLADDMGLGKTVQSLALVSRVMQEQRAA
AQEAGTSPRPFLVVAPTSVVPNWVGEAKRFAPDLRVVGIDETSKKKRRALSSVIGEAELV
ITSYALFRLDYESYSGIQWSGLLLDEAQFVKNRQSATHQLARRLDVPFKLAITGTPMENN
VMELWSLLSIVAPGLFPSPAGFVEFYQKPIEREADSEKLSQLRRRIRPLMLRRTKELVAT
ELPPKQEQTLEVELGPKQRKVYDTYLARERQRVLGLIGDFEKNRFAIFRALTVLRQVALD
AALVDEAHESVPSTKLDLLDDLLGDALGEGHRVLVFSQFTRFLGRVRGRLDAAGIEYAYL
DGATKKRDEVIERFRSGEAGVFLISLKAGGFGLNLTEADYCILLDPWWNPATESQAVDRA
HRIGQTRSVMVYRLVAKDTIEEKVMALKEAKAALFAAVMSDDGAAATGGITAEDVRELLG
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccagagtccccccggtgaggtgctgccgtcggccgcacccgggtcggtgacc
gccggccacgagccgttctgggagcaggacatccgcgcgctcgtcggttctgccgcgttc
gggaagggcgccgcctatgccgacgagggacgcgtccgcgagctgcagtggttcggtggc
cggacccgcctcttcggccaggtccgcggatccggtcggctgccctacgcggtgagcgtg
cagttgcgcgacgagggcgaccactggagcctgctcggcggcgcctgtagctgcccggtc
aagcgcgagtgcaagcacgtcgcggccgtcctgatcgaggccctgcgccgcgagcgcgag
ggcggagtggcgggcccgttcccgggtgaggccgccgtcgacgcggtgccggagtggcgc
agcgcactcgctcctctgctcgccggcgccgagcgctcgcgcaccggcatcccgctgggc
ctgcaattcgagctgctgcccggcgagcccgtgcgccgtccgcccggccgttacaactcc
taccgcccgccgcccgagccgcgtccgcgcctgggcgtgcgaccggtgcggatgggcgac
cgcgaccgctgggtgcgcaccggcgcgagctggcgcgacctcggctacctgcactacagc
cacgactacgacgagcgccagatcgacgtcatccgcgagatgcagggcctgctctcgggg
cacagcgcctccagctactactcgcccgacacctggctctacctcgaccagtgccggagc
gaggcgatctgggcggccctgcacggcgccgtccgcgcgggcatcggcctggtgatgggc
gatcgcgaccagacgccgctgaagatcctcgataccacggccaccgcctccatcgacgtc
acgcgcacccccgcgggcctcgagctgcgctcgctcgtcgcgatcggcgaccacccggcc
cccgaggagttcggtttcatcggcgacccggccgtcggcctctacacctgggaggggggc
gaggagctgcgtgcccgcccggtcaccctcatcccgttcgccgcgccgctgctgtcctcg
gcgcgcaccttcctgtggagccgcgaggcgatccgcatcccggtcgccgaggagtcggcc
ttcctcaccgagcactatcagcggctgcaccggctgttcgacatcgtctcccgggacggc
tccttcgaggcgcccgccgtgcccgagccgcggctggggctcaccctcgagcacaccgag
ggtgcgggcctgcgcggctcgtggtggtggcgttacgcggtggagggggcgcgcggcgtc
gacgccgagcggctgccgctgcgggtcggcgaggacgccggctaccgcgacctcgacgcc
gagcagcgcatcctcgactccctcgtcggcgcgggcctggacccggagtcgacccccgcc
ctggtctccccgtcgagccggcgcctgcgccccaccttcgacctgcgcggcatgcagacc
gtcggcttcctcaccggtgaggtcgagcgtctccgcgaactcggcacggtcgagatcgag
gaggtcggcgagcgcgtcgactaccgcgaggcgcagaccgcgcccgtggtcgccgtgcag
accgtcgcccagcccgacagccgcgactggttcaaccttgagatctcggtcaccgtcaac
gacgaggcggttccgctcgccgagatcttcctcgcgctcgcccgcggcgacgagtacatg
gtcttgcccagtggcgtctacttcgccctcgacgacgaacgcttcggccgcctccgcgag
ctgatcgccgaggcccgagagctttcggacgaccccggcgagactctgcggatcagccgc
ttccagtcctcgctctgggacgagctggtcgagctgggcgtcgtggaggcgcaggccgcc
gcgtggcgccgtgccgtcgagggcctctccggcttcaccgcgacgggtgccctcgagtcc
cgcgttcttcccgagggcttcgccgtcgagttgcggccctaccagcagctcggctacgac
tggctctcgttcctgtacgacaaccagctcggcggcgtgctcgcggacgacatgggcctg
ggcaagaccgtgcagtccctcgccctggtcagccgggtgatgcaggagcagcgcgccgcg
gcccaggaggcgggcacctcgccgcgcccgttcctcgtcgtcgcgcccaccagcgtcgtg
cccaactgggtcggcgaggccaagcgtttcgctccggacctgcgcgtggtcggcatcgac
gagacgtcgaagaagaagcggagggcgctctcgagcgtcatcggcgaggcggagctggtg
atcacctcctacgcgctgttccggctcgactacgagtcgtactcgggcattcagtggtcg
gggctcctgctcgacgaggcgcagttcgtcaagaatcgccagtcggccacgcatcagctc
gcgcgccgcctcgacgtaccgttcaagctcgccatcaccggcacgccgatggagaacaac
gtgatggagctgtggtcgctcctgtcgatcgtcgctccgggcctgttcccctcgcccgcc
ggtttcgtcgagttctatcagaagccgatcgagcgcgaagccgacagcgagaagctctcg
caactgcggcgtcgcattcgcccgctgatgctgcggcgcacgaaggagctcgtcgccacg
gagctgccgcccaagcaggagcagaccctcgaggtcgagctcggcccgaagcaacggaag
gtctatgacacctatctggcgcgggagcggcagcgggttctcggcctgatcggcgacttc
gagaagaaccgcttcgcgatcttccgcgcgctgacggtgctgcgccaggtcgccctcgat
gcggcgctggtcgacgaggcgcacgagagcgtcccctccaccaagctcgacctgctcgac
gacctgctgggcgacgcgctcggtgaaggccatcgcgtgctggtctttagccagttcacg
cggttccttggccgggtccgcggccgactcgacgcggccggcatcgaatacgcctacctc
gacggagcgacgaagaagcgcgacgaggtcatcgagcggttccgctccggcgaggcggga
gtgttcttgatctcactcaaggcgggtggattcgggctcaacctcaccgaggccgactac
tgcattctgctcgacccctggtggaacccggccacggagtcgcaggccgtggaccgcgcg
caccgcatcggtcagacccgctcggtgatggtctatcggcttgtggcgaaggacacgatc
gaggagaaggtgatggccctcaaggaggcgaaggccgcgctcttcgcggcagtcatgtcc
gacgacggcgccgctgccacgggcgggatcaccgccgaggacgtgcgcgagctgctgggc
tga
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