Rhodococcus ruber: CS378_01755
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Entry
CS378_01755 CDS
T05142
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00300
Lysine biosynthesis
rrz00470
D-Amino acid metabolism
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01120
Microbial metabolism in diverse environments
rrz01230
Biosynthesis of amino acids
Module
rrz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CS378_01755
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CS378_01755
Enzymes [BR:
rrz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CS378_01755
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Ago_N_2
Motif
Other DBs
NCBI-ProteinID:
ATQ27575
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Position
382382..383248
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AA seq
288 aa
AA seq
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MDFSKGHGTENDFVILPDPEVRISLEPKRVAALCDRRRGLGADGVLRVARAGALVDAGVL
PALPEGTAADDWFMDYRNADGSIAEMCGNGVRVFAHFVTAGGFESRDAFVVGSRAGGKPV
QVHSADATHGDVTVDMGVVRELGESTATIEGRVYRGLGIDVGNPHLACVDPHLTAATLAA
LDLSGPGFDPGFFPQGVNIEFLTPIAAGAVDMRVYERGVGETRSCGTGTVAAAAAALRFD
GADSGTVRVHVPGGAVQVRLEDGRAALRGPSVLVASGTIGDHWWDGLD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcaagggccacggcaccgagaacgacttcgtgatccttcccgatccggag
gtgcggatttccctcgagccgaagcgggtggcggcgttgtgcgaccgtcgtcgtggtctc
ggcgccgacggggtcctgcgggtggcgcgggccggggcgctcgtcgacgcgggggtcctg
cccgcgttgccggaggggacggccgccgacgactggttcatggactatcgcaacgccgac
gggtcgatcgcggagatgtgcggcaacggggtgcgggtgttcgcgcacttcgtcaccgcc
ggcgggttcgaatcgcgtgacgcgttcgtcgtcggcagtcgcgccggcggcaagccggtg
caggtgcacagcgccgacgcgacgcacggcgacgtcaccgtcgacatgggcgtggtgcgc
gagctgggggagtcgaccgcgaccatcgaaggccgggtgtaccgcggtctgggcatcgac
gtcgggaacccgcatctggcctgcgtcgatccgcacctgaccgcggcgaccctggccgcc
ctcgacctgtccggtccgggtttcgaccccggcttctttccccagggcgtcaacatcgag
ttcctcaccccgatcgccgcgggcgcggtggacatgcgggtgtacgagcggggggtgggc
gagacccggtcctgcggcaccggcacggtcgccgccgccgcggcggcgctgcgcttcgac
ggcgccgactccggcaccgtccgggtgcacgtccccggcggggcggtgcaggtgcgcctc
gaggacggccgggccgcgctgcgtggcccctcggtgctggtcgcgtcgggcacgatcggc
gatcactggtgggacggcctggactga
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