Rhodococcus ruber: CS378_03145
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Entry
CS378_03145 CDS
T05142
Name
(GenBank) Rpf-interacting protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrz01002
]
CS378_03145
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrz01011
]
CS378_03145
Peptidases and inhibitors [BR:
rrz01002
]
Cysteine peptidases
Family C40
CS378_03145
Peptidoglycan biosynthesis and degradation proteins [BR:
rrz01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
CS378_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
ATQ27829
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All DBs
Position
677435..679300
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AA seq
621 aa
AA seq
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MSRQSSRTPRRRRLPRTARLVLGIGLAASLIAGTAASAGAVPPPPPNPSDADLAAAGGAV
AAGLDQVGGLILRIAAADQHLAELENQVAIKRENVNRALVDLQSARDAADAAAHAVTLSQ
QALKDAGTRIRQAQQDFDAFARDSYVQGTNVASLASFIGSTGPDDLLDRAQIMRLLSAGR
TAVLDALERARTEQANRDSRARASKQEADAAAAAAEERRAAAEAAISEARTALAAQTAEK
QRIEQDRAQAQAELDRARGTVTGLEGQRAQYAEWDRQRQAEEAATAAAEAAARQAAADAA
RRVAADADANARAAELANGQRPHTQIDGYVRPQAAAADSGESEVGFESPLPPTSGTTRPG
RATSGQDGSDADESGADESGADESGADGSGTGGSDTDGAGTDDSGTDDSGSDGSGTDGAG
TDGSGTGGSGDASTDGSDESGSEDATSPDRADPVVEEDTTTTPPTRSRPRTSPERGSTLT
GAAAVETVIDRAMSQIGVPYAWGGGDENGPTLGIRDGGVADSYGDYNKVGFDCSGLMIYA
FAGIGISLPHYTGYQYTAGEQVPSAQMRRGDMIFYGPNASQHVGLYLGDGQMIEAPQSGS
HVKISPVRWDGMTPYVVRMVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcagtcgtcgcggacgccccgaagacgccggttgccccgcacggcgcggctg
gtcctcggcatcggcctggccgcctcgctgatcgccggcactgccgcgtccgccggggcg
gtcccgcccccgccacccaatccgagcgatgccgatctcgcggccgccgggggtgccgtc
gccgccgggctggaccaggtgggcggtctcatcctccgcatcgccgcagccgaccagcac
ctcgccgaactcgagaaccaggtggcgatcaaacgggagaacgtcaaccgcgccctggtc
gacctgcagtccgcccgcgacgccgccgacgccgccgcccacgccgtcaccctgtcgcag
caggcgctgaaggacgcgggcacccggatccggcaggcccagcaggacttcgacgccttc
gcccgcgacagctacgtccagggcaccaatgtcgcctcgctcgcctcgttcatcggctcc
accgggcccgacgatctgctcgaccgcgcccagatcatgcgtctgctctccgcgggccgc
accgccgtcctcgacgcgctcgaacgtgcccgcaccgagcaggccaaccgggactcgcga
gcgcgcgccagcaagcaggaagcggacgccgccgccgcggcggcggaggaacgtcgtgcc
gccgccgaggccgccatcagcgaggcgcgcaccgcgctggccgcgcagacggccgagaag
caacgcatcgaacaggaccgcgcacaggcgcaggccgaactcgaccgggcccgcggcacc
gtcaccggactcgagggtcagcgcgcgcagtatgcggagtgggatcggcagcggcaggcc
gaggaggccgcgacggcggcggccgaggctgccgcgcggcaggcggcggccgacgccgcc
cggcgcgtcgccgccgacgccgacgccaatgcccgcgcggccgagttggccaacgggcag
cgcccccacacccagatcgacggctacgtgcggccccaggccgcggccgccgactccggc
gagtccgaggtcgggttcgagtcgccgctgccgccgacctccggcacgacccggcctggg
cgcgccacgtccgggcaggacggatcggacgccgacgaatccggtgccgacgaatccggt
gccgacgaatccggcgcggacgggtcgggtacgggcgggtccgataccgatggtgcgggc
accgacgattcgggcaccgacgattcgggcagcgacggctcgggcaccgatggtgcgggc
accgacggctcgggcaccggcggctcgggcgacgcgtcgaccgacggcagcgacgagtcc
ggctccgaggacgcgacgagtcccgaccgcgccgacccggtggtggaggaggacaccacc
accactccgcccacccgcagccggccccggaccagccccgagcggggctcgaccctcacc
ggcgcggccgccgtcgagacggtgatcgaccgggcgatgtcccagatcggggtgccttac
gcgtggggcggtggcgacgagaacggtccgaccctcggcatccgcgacggcggcgtcgcg
gacagctacggcgactacaacaaggtcggcttcgactgctccgggctgatgatctacgcg
ttcgccgggatcgggatctcgctgccgcactacaccggctaccagtacaccgccggcgag
caggtgccgtcggctcagatgcgccgcggcgacatgatcttctacggcccgaacgccagc
cagcacgtgggcctgtacctgggcgacgggcagatgatcgaagccccgcagtcgggttcg
cacgtgaagatctcaccggtacgctgggacggcatgaccccgtacgtggtacggatggtg
tcctga
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