Rhodococcus ruber: CS378_03890
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Entry
CS378_03890 CDS
T05142
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrz03009
]
CS378_03890
Enzymes [BR:
rrz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CS378_03890
Ribosome biogenesis [BR:
rrz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CS378_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ATQ31769
LinkDB
All DBs
Position
complement(861389..862183)
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AA seq
264 aa
AA seq
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MSNARPARHQHAAERPQLPAGEGVRLQKVLAQAGVASRRAAEELIAAGRVEVDGAIVTEQ
GLRVDPENAVIRVDGIRVVVDKDLVHLVLNKPRGWQSTMSDDLGRPCVGDIVSERVAAGQ
RLFHVGRLDADTEGLLLLTNDGELAHRLMHPSYEVTKTYLATVKGVLPRGIGKQLRAGVE
LDDGPAKVDSFALLQVNEGQSLVRLELHEGRKHIVRRLLDAVGHPVIRLVRTDIGPVALG
DQRPGTLRVLGRKEVGSLYQAVGL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atcagcaacgccagacccgcccggcaccagcacgctgccgaacgcccgcaactgcccgcc
ggcgaaggcgtgcgcctgcagaaggtcctcgcccaggccggagtcgcgtcccgccgggcc
gccgaagaactcatcgccgccggccgcgtcgaggtcgacggcgccatcgtcaccgagcag
ggcctgcgcgtggaccccgagaacgccgtgatccgcgtcgacggcatccgcgtcgtcgtc
gacaaggacctcgtccacctcgtgctcaacaagccccgcggctggcagtccaccatgtcc
gacgacctcggccgcccctgcgtcggcgacatcgtctccgaacgcgtcgccgccggccag
cgcctcttccacgtcggccggctcgacgccgacaccgaaggactgctgctgctcaccaac
gacggtgaactcgcccaccggctcatgcacccctcctacgaggtgaccaagacctacctc
gccacggtcaagggcgtccttccgcgcggcatcggcaagcagctgcgcgccggcgtcgaa
ctcgacgacggccccgccaaggtcgactccttcgcgctcctccaggtcaacgagggccaa
tccctggtccgcctcgaactgcacgaaggccgcaagcacatcgtgcgccggttgctcgac
gccgtcggccaccccgtgatccgcctcgtgcgcaccgacatcggccccgtcgcgctcggc
gaccagcgacccggcaccctgcgggtgctcggccgcaaggaagtcggcagcctctaccag
gcggtgggcctgtga
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integrated database retrieval system
