Rhodococcus ruber: CS378_03945
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Entry
CS378_03945 CDS
T05142
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrz03009
]
CS378_03945
Enzymes [BR:
rrz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
CS378_03945
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
CS378_03945
Ribosome biogenesis [BR:
rrz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CS378_03945
23S rRNA modification factors
CS378_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
DUF5742
Motif
Other DBs
NCBI-ProteinID:
ATQ27968
LinkDB
All DBs
Position
complement(873479..874303)
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AA seq
274 aa
AA seq
DB search
MARRARVDAELVRRGLARSREHAGELIAAGRVLVHGTVATKPATQVDPGAPLLVTEVADE
VEWASRGAHKLLGALEAFTDRGLRVAGRRCLDAGASTGGFTDVLLHEGAREVVAVDVGYG
QLVWRLQSDDRVRVIDRTNVRNIDADAIGGPVELVVADLSFISLKLVLPAFVRCVTAGAD
LLPMVKPQFEVGKERVGSGGVVRAAALRTEAVLDVAREAQTLGLRTLGAVASPLPGPSGN
VEYFLWLRAGEPGPAEPDADVVELVERAVQEGPQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtggcccggcgagcgcgagtcgacgcggagctggtccgtcggggcctcgcccggtcccgc
gagcacgccggcgagctgatcgctgcgggacgggtcctcgtccacggcacggtcgcgacg
aagcctgcgacgcaagtcgatccgggggcgcccctgttggtcaccgaggtcgccgacgag
gtggagtgggcgtcacgaggtgctcacaagctgctcggcgccctcgaggcgttcaccgac
cggggacttcgggtcgccggccggcggtgtctcgacgccggggcctccaccgggggcttc
acggacgtgctgttgcacgagggcgcacgggaagtcgtcgccgtcgacgtgggctacggc
cagctggtgtggcggctgcagtccgacgaccgggtccgcgtgatcgatcgaacaaacgtg
cgtaacatcgatgcggacgcgatcggggggccggtcgagctggtggtggcggatttgtcc
ttcatctcgctgaagctggtgcttccggcgttcgtgcggtgcgtgaccgcgggcgcagat
ctgctacccatggtcaaaccgcagttcgaggtcgggaaggagcgggtcggcagtggcggt
gtcgtccgggctgcggcattgcggaccgaggcggtcctcgacgtcgcgcgcgaagcccag
actctcgggctgcgtaccctcggggcggtggccagtccgctgcccggtccgtccggcaat
gtcgaatacttcctgtggctgcgcgccggggaaccgggcccggccgagccggacgcggac
gtggtcgagctggtcgaacgagccgtgcaggaaggaccccagtga
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