Rhodococcus ruber: CS378_04040
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Entry
CS378_04040 CDS
T05142
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CS378_04040
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rrz01007
]
CS378_04040
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrz03016
]
CS378_04040
Enzymes [BR:
rrz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CS378_04040
Amino acid related enzymes [BR:
rrz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CS378_04040
Transfer RNA biogenesis [BR:
rrz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CS378_04040
Prokaryotic type
CS378_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ATQ27982
UniProt:
A0A098BN21
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All DBs
Position
complement(896820..899306)
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AA seq
828 aa
AA seq
DB search
MRVAQSWLTEILQRATPEWDVTAEELDAGFVRVGLEVEEVDTLARIDGPLVVGRVLEITE
LTEFKKPIRFCQVDVGEDAPRGIVCGARNFAEGDLVVVALPGAVLPGGFAIASRKTYGQV
SDGMICSVAELGVGKDHSGILVLEEGTAEPGTDANDLLGLGDTVIELNITPDRGYCFSLR
GLTRELACGFDLEFADPAHVAPHPADGPAYPIRLERETGATRFAARKVTGIDPHAVSPWW
LQRRLLLSGIRPISPAVDVTNYVLLELGQPLHAFDAATLRGELVVRRAKAGEKLTTLDGV
ERTLDPEDVVITDDSGVISLAGIMGGAATEVSGTTTEVLLEAATWDPLAVFRSARRHKLV
SEAGKRFERNVDPEVALPALDRAAALLVEIAGGRVEPVLTDLSVPVEPVSIRMDIDLPDR
TAGVAYPTGTAARRLTQIGCGVEVGVGPDGHGQLVVTPPTWRPDLRQPADLVEEVLRLEG
LEQIPSVLPAAPAGRGLTPSQKRRRAVGRALAADGHVEVLAPVFLPAHVFDTWGLAADDP
RRTTTTVLNPLEADRPELATTLLPGLLEVLARNVSRGQRDLALYAIAQVVLPGPGTRPVP
PLPVDRRPTDEEIALLEGSLPAQPVHVGAVLCGLREPAGPWGPGRPADATDAFAAAETVA
AAAGVRLQRRAAQYLPWHPGRCAELLVDGVVVGHAGELHPAVLERAGLPARTCAFELDLD
ALPMVESLPAPKISPFPAVLQDVAVVVAEEIPAADVEEALRAGGGELLEDIRLFDVFEGA
QVGEGRKSLAFALRFRAADRTLTEDEASAARDAAVAAAGTAVGAELRH
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagtagcgcagtcctggctgaccgagatcctgcagcgcgccacccccgagtgggac
gtcactgccgaggaactcgacgcgggattcgtccgggtcggactcgaggtggaggaggtc
gacaccctcgcgcgcatcgacggccccctcgtcgtcggccgcgtcctcgagatcaccgag
ctcaccgaattcaagaagcccatccgattctgccaggtcgacgtcggcgaggacgccccg
cgcggcatcgtgtgcggcgcccgcaacttcgccgagggtgacctggtggtcgtcgcactg
cccggcgcggtgctgcccggcggcttcgccatcgcctcccgtaagacctacggccaggtc
tccgacgggatgatctgctccgtcgccgagctcggggtcggcaaggaccactcgggcatc
ctcgtgctcgaggagggcaccgccgagccgggcaccgacgccaacgacctcctcggcctc
ggcgacaccgtcatcgagctgaacatcacgcccgaccgcggctactgcttctcgttgcgc
ggcctgacccgcgaactcgcgtgcggcttcgacctcgagttcgccgatcccgcgcacgtc
gcaccccaccccgccgacggcccggcgtaccccatccggctcgaacgcgaaaccggcgcc
acccgcttcgctgcccgcaaggtcaccggcatcgacccccatgccgtgtccccgtggtgg
ctgcaacggcggctgctgctgtccggcatccgcccgatctccccggcggtcgacgtcacc
aactacgtgctgctcgagctcggccagccgctgcacgccttcgacgccgccaccctccgc
ggtgagctcgtcgtccggcgtgcgaaggcgggggagaagctgacgacactcgacggcgtc
gaacgcacccttgatcccgaggacgtcgtcatcaccgacgactccggggtgatctccctc
gccggcatcatgggcggcgccgcgaccgaggtgagcggcacgaccaccgaggtcctgctc
gaggccgccacctgggatccgctggccgtgttccgcagcgcccggcgccacaagctggtg
agcgaggcgggcaagcgtttcgagcgcaacgtcgaccccgaagtggcgctgccggccctg
gaccgggccgcggcgctgctcgtggagatcgccggtggccgcgtcgagccggtcctgacc
gacctgtccgtccccgtcgagccggtctcgatccgcatggacatcgacctgcccgaccgc
accgccggggtcgcctacccgaccggcaccgccgcgcgccggctcacccagatcgggtgc
ggcgtcgaggtcggtgtcggcccggacggacacggccagctcgtggtcacgccgccgacc
tggcgtcccgacctgcgtcagcccgccgacctcgtggaggaggtgctccggctcgagggg
ctcgaacagatcccgtccgtgctcccggccgccccggcgggccgcggactgaccccgagc
cagaaacgacgccgcgccgtgggccgcgccctggccgccgacggtcacgtcgaggtgctc
gcccccgtcttcctgccggcgcacgtattcgacacgtggggtctcgccgccgatgacccc
cgccgcaccaccacgacggtcctcaacccgctcgaggccgatcgtcccgagctggcgacg
acgctgctgcccggcctgctcgaggtgctcgcccgcaacgtgtcccgaggtcagcgcgac
ctggcgctctatgcgatcgcgcaggtcgtcctgcccggccccggcacccggccggtgccg
cccctgccggtggaccggcgccccacggacgaggagatcgcgctgctcgagggctcgctg
cctgcgcagcccgtccacgtcggggcggtgctgtgcggcctgcgggaacccgccgggccg
tgggggccgggccggcccgcggacgcgaccgacgcgttcgccgcggccgagaccgtcgcg
gccgccgcgggtgtccggctgcagcgccgcgccgcgcagtacctgccgtggcatccgggc
cgctgcgccgaactgctggtcgacggtgtcgtcgtcggtcacgccggtgagttgcatccg
gcagtgctcgagcgggccgggctgcccgcccgcacgtgcgccttcgaactcgacctcgac
gcgctgccgatggtggagtcgctgccggcgccgaagatctccccgttccccgctgtgctg
caggacgtcgccgtcgtcgtggccgaggagatcccggccgccgacgtcgaggaggcgctg
cgcgcgggcggcggcgaactgctcgaagacatccgcctgttcgacgtgttcgagggggcg
caggtgggggaggggcgtaagtcgctcgccttcgctctgcgcttccgcgcggcagaccgc
accctcacggaggacgaggccagcgcggcccgggacgccgctgtggccgcggccggcacg
gcggtcggcgccgaactgcggcactga
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