Rhodococcus ruber: CS378_05170
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Entry
CS378_05170 CDS
T05142
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03030
DNA replication
rrz03430
Mismatch repair
rrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CS378_05170
03430 Mismatch repair
CS378_05170
03440 Homologous recombination
CS378_05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrz03032
]
CS378_05170
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_05170
Enzymes [BR:
rrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CS378_05170
DNA replication proteins [BR:
rrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CS378_05170
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CS378_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ATQ31801
LinkDB
All DBs
Position
1165715..1167460
Genome browser
AA seq
581 aa
AA seq
DB search
MQLGFDELDTPLRETLFVVVDLETTGGSSTDDAITEIGAVKIRGGEVLGEFATLVDPGRS
IPPNIVQLTGITTAMVRSAPRIEQVLPSFLEFAAGAVLVAHNAGFDVGFLRAAASRAEVA
WPRFTVLCTVKLARRVLGRDEAPSVRLSALAELFRVSTTPTHRALDDARATVDVLHALIE
RVGNQGVHSLTELRDYLPAVTAEQRAKRSLAAHLPRRPGVYLFRGPSDEVLYIGTAVDLR
RRVRNYFTGSETRPRLREMVALATRIDHVECAHALEAGVRELRLLAAHAPPYNRRSKFPA
RGWWITLTDEAFPRLSVVRTPAAAPPHPVGGPTVDAVGPFSSRADAAAVATTVAEFCRLR
TCTRRIPRTKRHGEHCPPDAVGACAAAVAGLQTPAEYAQQVDLARALLRGDDDEPLHRMR
RRVEHLGAAELFESAARLRDRTADAVLALRRTQRLAALAAVDELVAARRRVEGGWEFAVI
RAGRLAGAGVAPRGVPPMPVVDAIVAAAETVRPTTAPLRGALVEELGLLVRWLHDDGVRI
VRTSQGWSEPLRGAGAWAQWGELARTARAGAEPVPVAHPLR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctcgggttcgacgaactggacacgccgttgcgggagacgttgttcgtcgtcgtc
gacctcgagaccaccggcggcagttccacggacgacgccatcacggaaatcggcgcggtc
aagatccgtggcggcgaggttctcggcgagttcgccacgctcgtcgacccgggccgttcg
atcccgccgaacatcgtccagctcaccggcatcacgaccgccatggtgcgttccgcgccc
cggatcgagcaggttctgccctcgttcctcgagttcgccgccggggccgtgctcgtcgcg
cacaacgcgggcttcgacgtcgggttcctgcgggccgcagcgtcccgcgccgaggtcgcg
tggccccggttcacggtgctgtgcacggtcaagctcgcccgccgcgtgctcggccgggac
gaggccccgtccgtgcgactgtcggcgctggccgaattgttccgtgtgtccaccacgccc
acgcaccgtgctctcgacgatgcccgcgccaccgtcgacgtcctgcacgcgctcatcgag
cgcgtcgggaaccagggcgtccacagcctcaccgaactgcgggactatctgccggcggtc
accgcggagcaacgcgccaagcggtccctcgcggcacacctgccgcgacggcccggtgtg
tacctgttccgcgggccctccgacgaggtgctgtacatcggtacggccgtcgacctgcgc
cgccgcgtgcgcaactacttcaccggttccgagacccggccccggctgagggagatggtg
gcgctcgccacccggatcgaccacgtggaatgcgcccatgccctcgaggcgggggtgcgg
gagttgaggctgctcgccgcgcacgccccgccctacaaccgccgctccaagttccccgcc
cggggctggtggatcaccctcaccgacgaggcgttcccccggctgtccgtcgtgcggaca
cccgccgcggctcccccgcatccggtcggcggccccaccgtcgacgccgtcggcccgttc
tcgtcgcgggccgacgccgccgccgtcgccaccaccgtcgccgagttctgccgccttcgg
acctgcacccgccggatcccccgcacgaagcgccacggcgagcactgcccgccggacgcc
gtcggagcctgcgctgccgcagtagccggactgcagacacccgccgagtacgcgcagcag
gtggatctcgcccgcgccctgcttcgcggcgacgacgacgagccgctgcatcggatgcgc
cggcgtgtcgaacacctcggcgctgccgaactgttcgagagcgcggcccggttgcgggac
cggacggccgacgccgtgctcgcactgcgccggacgcagcgcctggccgcgctcgcggcg
gtggacgagctggtcgccgcccgccggcgcgtcgagggcggctgggagttcgcggtgatc
cgggcgggccggctcgcgggggcgggagtcgctccgcgcggcgtcccgccgatgcccgtg
gtcgacgcgatcgtcgcggcagccgagacggtgcggccgacgacggcgccgttgcgcggc
gcgctcgtcgaggaactcggcctgctggtccgctggctccacgacgacggggtccgcatc
gtccgaacctcccagggctggtccgagccgcttcgcggcgccggcgcctgggcgcagtgg
ggtgaactcgcccggacggcacgtgccggggccgagccggtcccggtcgcgcacccccta
cgctga
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