Rhodococcus ruber: CS378_07460
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Entry
CS378_07460 CDS
T05142
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CS378_07460 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrz03019
]
CS378_07460 (groL)
03110 Chaperones and folding catalysts [BR:
rrz03110
]
CS378_07460 (groL)
03029 Mitochondrial biogenesis [BR:
rrz03029
]
CS378_07460 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrz04147
]
CS378_07460 (groL)
Enzymes [BR:
rrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CS378_07460 (groL)
Messenger RNA biogenesis [BR:
rrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CS378_07460 (groL)
Chaperones and folding catalysts [BR:
rrz03110
]
Heat shock proteins
HSP60 / Chaperonin
CS378_07460 (groL)
Mitochondrial biogenesis [BR:
rrz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CS378_07460 (groL)
Exosome [BR:
rrz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CS378_07460 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CS378_07460 (groL)
Exosomal proteins of breast cancer cells
CS378_07460 (groL)
Exosomal proteins of colorectal cancer cells
CS378_07460 (groL)
Exosomal proteins of bladder cancer cells
CS378_07460 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ATQ28570
LinkDB
All DBs
Position
complement(1636958..1638574)
Genome browser
AA seq
538 aa
AA seq
DB search
MSKQIEFNETARRALERGVDQLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIIKAGLKNVAAGANPIALGSGIG
RAAEKVSEALLAAATPVEGKEAIAQVATVSSRDEEIGNMVGEALSTVGKDGVVTVEESST
LQTELVVTEGVQFDKGFLSPYFITDIDAQQAVLEDAVILLYRDKIGSLPDFLPLLEKIAE
NGKPVLIIAEDVEGEVLSTLVVNSIRKTLKAVAVKAPFFGDRRKAFLDDLAVVTAGTVIN
SDVGLTLKDAGLDLLGSARRVVVTKDSTTIVDGAGTQQDIENRVAQLRREIEATDSDWDR
EKLEERLAKLSGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVEEGIVPGGGSALVQA
ARELDALENSLSGDEATGVAVLRAALAAPLYWIAANAGLDGSVVVNKVSEAPAGSGFNAA
TLTYGDLLADGVVDPVKVTRSAVVNASSVARMVLTTESAVVDKPEEAPEAGHGHGHAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaatcgagttcaacgagaccgcgcggcgggcactcgagcgtggcgtcgat
cagctcgccgacgccgtcaaggtcaccctcggcccgcgtgggcggcacgtggtgctcgcc
aaggcgttcggcggtccgaccgtcaccaacgacggcgtcagcatcgcccgggagatcgag
ctggaggacccgttcgagaacctcggcgcccagctggtcaagagcgttgccaccaagacc
aacgacgtcgccggtgacggcaccaccaccgccacggtgctcgcccaggccatcatcaag
gccggcctgaagaacgtcgcggccggcgccaatcccattgcgctcggcagcggcatcggc
cgggccgccgagaaggtgtcggaggcactcctcgccgccgccaccccggtcgagggcaag
gaagccatcgcccaggtcgccaccgtctcctcgcgcgacgaggagatcggcaacatggtc
ggcgaggccctgagcaccgtcggcaaggacggtgtcgtcaccgtcgaggagtcctcgacg
ctccagaccgagctcgtcgtcaccgagggcgtccagttcgacaagggcttcctgtcgccc
tacttcatcaccgacatcgacgcacagcaggcggtgctcgaggatgccgtcatcctcctc
taccgcgacaagatcggctccctgcccgatttcctgccgctgctcgagaagatcgccgag
aacggcaagcccgtcctgatcatcgcggaggacgtcgagggggaggtgctctccaccctc
gtggtcaactccatccgcaagaccctcaaggccgtcgcggtcaaggcgccgttcttcggt
gaccgccgcaaggcgttcctcgacgacctcgccgtcgtcaccgccggcaccgtcatcaac
tccgacgtcgggttgaccctgaaggatgccggtctcgacctgctcggttcggcccgccgg
gtggtggtcaccaaggacagcaccacgatcgtggacggtgccggtacgcaacaggacatc
gagaaccgcgtcgcgcagctgcgtcgcgagatcgaggccaccgattccgactgggaccgg
gagaagctcgaggagcggctcgcgaagctctccggcggcgtcgcggtgatcaaggtgggt
gcagccaccgagaccgacctcaaggagcgcaagttccgtgtcgaggacgctgtcaacgcc
gccaaggccgcggtcgaagagggcatcgtgcccggtggtggttcggcgctcgtgcaggcc
gcccgggagctggacgcgctcgagaactcgctctcgggtgacgaggccacgggtgtcgcc
gtgctgcgcgccgcgctcgcggccccgctgtactggatcgccgctaacgccggcctcgac
gggtcggtcgtggtgaacaaggtgtccgaggcccccgccgggtccgggttcaacgcagcc
accctcacctacggtgacctgctcgccgacggtgtcgtggatccggtcaaggtgacccgg
tccgcggtcgtcaacgcgtcctcggtggcgcggatggtgctgaccacggagagcgccgtc
gtcgacaagccggaggaggcgcccgaggccggtcacggccacggtcacgctcactag
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