Rhodococcus ruber: CS378_09165
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Entry
CS378_09165 CDS
T05142
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrz03032
]
CS378_09165
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_09165
Enzymes [BR:
rrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CS378_09165
DNA replication proteins [BR:
rrz03032
]
Prokaryotic type
DNA Topoisomerases
CS378_09165
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CS378_09165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
ATQ28878
LinkDB
All DBs
Position
complement(2044913..2045920)
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AA seq
335 aa
AA seq
DB search
MRVRRSNPFGPGIRRVRRGRGFTYQDADGNRVTDEAVLARIDELVIPPAWRKVWICPHPD
GHIQAVGIDAAGRRQYLYHQRWREERDEEKHDRVLAMAARLPAWRDQVQADLTERGVGRR
RAEAVALRLLDRAVFRVGGEEYAAENGTYGVATLLRSHVRLRDTALTFDYPAKGGIRRVV
TVDDADLATAVRALRRVRRGPGRLLVYRDGDAIRELHADDVNARFKELAGEDCSAKDLRT
WGATVLAAAAFAEHDVPGSRRGRARVEAAVMRAVSEELGNTPAVARASYVDPRVVRAWAE
GRTIRAALRRAGKCGDPDESRAVVERAVIRLLRRS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgcggcggagcaacccgttcggtcccggcatccggcgggtgcggcgcgggcgg
ggcttcacctatcaggacgccgacggcaatcgtgtgaccgacgaggccgtcctcgcccgt
atcgacgaactcgtcatccctccggcgtggcgcaaggtgtggatctgtccccaccccgac
gggcacatccaggccgtgggcatcgacgccgccggtcggcgccagtacctgtaccaccag
cggtggcgcgaggagcgtgacgaggagaagcacgaccgggtcctggcgatggcggcccgg
ctgccggcctggcgggaccaggtgcaggccgacctgaccgagcggggggtcgggcggcgc
cgggccgaggcggtggcgctgcggttgctggaccgggccgtgttccgggtgggtggggag
gagtacgcggccgagaacggaacctacggggtcgcgacgttgctgcgcagccacgtgcgg
ctgcgtgataccgccctgacgttcgactacccggccaagggcggaatccggcgggtcgtc
acggtcgacgacgccgacctggcgacggctgtccgggcgctgcgccgggtccgcaggggg
cccggccggctgctggtctaccgcgacggtgacgcgatccgcgagttgcacgcggacgac
gtcaacgcccggttcaaggagctcgccggtgaggactgcagtgcgaaggatctgcgcacg
tggggtgcgacggtgctggccgccgcggccttcgccgagcacgacgtgcctgggagtcgg
cgcggccgggcgcgggtcgaggcggccgtgatgcgggcggtctcggaggagctcggcaac
acccccgccgtggcacgggcctcgtacgtcgacccgcgcgtggtgcgggcctgggcggag
ggccgcacgatccgtgccgcactgcggcgagccggaaagtgcggcgatccggacgaatcc
cgggccgtcgtcgagcgcgccgtgatccggctgctgcgccggtcctga
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