KEGG   Rhodococcus ruber: CS378_11970
Entry
CS378_11970       CDS       T05142                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rrz  Rhodococcus ruber
Pathway
rrz00010  Glycolysis / Gluconeogenesis
rrz00020  Citrate cycle (TCA cycle)
rrz00260  Glycine, serine and threonine metabolism
rrz00280  Valine, leucine and isoleucine degradation
rrz00310  Lysine degradation
rrz00380  Tryptophan metabolism
rrz00620  Pyruvate metabolism
rrz00630  Glyoxylate and dicarboxylate metabolism
rrz00640  Propanoate metabolism
rrz00670  One carbon pool by folate
rrz00785  Lipoic acid metabolism
rrz01100  Metabolic pathways
rrz01110  Biosynthesis of secondary metabolites
rrz01120  Microbial metabolism in diverse environments
rrz01200  Carbon metabolism
rrz01210  2-Oxocarboxylic acid metabolism
rrz01240  Biosynthesis of cofactors
Module
rrz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rrz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rrz_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rrz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rrz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rrz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CS378_11970 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CS378_11970 (lpdA)
   00620 Pyruvate metabolism
    CS378_11970 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CS378_11970 (lpdA)
   00640 Propanoate metabolism
    CS378_11970 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CS378_11970 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CS378_11970 (lpdA)
   00310 Lysine degradation
    CS378_11970 (lpdA)
   00380 Tryptophan metabolism
    CS378_11970 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CS378_11970 (lpdA)
   00670 One carbon pool by folate
    CS378_11970 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rrz04147]
    CS378_11970 (lpdA)
Enzymes [BR:rrz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CS378_11970 (lpdA)
Exosome [BR:rrz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CS378_11970 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 FAD_oxidored DAO HI0933_like FAD_binding_3 GIDA Lys_Orn_oxgnase 3HCDH_N Thi4 AlaDh_PNT_C NifZ 2-Hacid_dh_C XdhC_C
Other DBs
NCBI-ProteinID: ATQ29366
LinkDB
Position
complement(2677555..2678955)
AA seq 466 aa
MTEKYDVLVVGSGPGGYVAAIRAAQHGLRTAVVERDRLGGICLNWGCIPTKALLHGADVA
HTLANLRPLGFSASGVKFDMGRLVEFSRSVSGRLSDGIGYLMKKNGIDVVRGSARLLDKG
VVAVTAADESVSEYRADHIILATGARPRSVPGVVPDGDRVWTYFDALVPSELPKSLLVIG
SGAIGVEFASLYNDLGTDVTLVEVAPQIMPVEDAAVAGHVRRQFEKRGIRIHTGASVSEL
TVGTNAVTVAVRSADGTIDESTVDRVLVAAGIQGNVEDLGLEELGVEVDRGFVTTDQWCR
TTAFGVYAIGDVAGAPCLAHKASHEAVLCVDRLAGADHVRPLDRDYVPGCTYARPQVASL
GLTEERARATGRRLQIGQFDLQASGKALAIGEADGFVKTIFDADSGELLGAHMVGPDVTE
QIQGFGIARSVEATADDLAEVVFAHPTLSEAMHESVLAALGRPINM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgacagagaaatacgacgtcctcgtcgtcggcagcgggccgggtggctatgtcgccgcc
atccgcgccgcgcagcacggtctgcgcactgcggtcgtcgagcgggaccggctcggcggg
atctgcttgaactgggggtgcatccccaccaaggcactgctgcacggcgccgatgtcgca
cacacgctggcgaacctgcgtccgctcggattcagcgcgagcggtgtaaaattcgacatg
ggacgcctcgtcgagttcagccggtcggtgtccgggcgactgtccgacggcatcggctac
ctgatgaagaagaacggcatcgacgtcgtccgggggtcggcgcggctgctcgacaagggc
gtcgtcgcagtgacggccgcggacgagtcggtgtccgagtaccgggccgaccacatcatc
ctggccaccggagcccggccgcgatcggtacccggtgtcgtccccgacggtgaccgggtc
tggacgtacttcgatgccctggtcccgtcggagttgccgaagtccttgctggtcatcggc
tccggcgccatcggcgtcgaattcgcgagtctgtacaacgatctcggcaccgacgtcacc
ctcgtcgaggtggctccgcagatcatgccggtcgaggatgccgccgtcgcgggccacgta
cggcggcagttcgagaagcgaggcatcaggattcacaccggcgcctcggtgtccgaactg
acggtcggcacgaacgccgtcaccgtggccgtccggtcggccgacggaacgatcgacgag
tcgaccgtggacagggttctcgttgcggccggaatccagggcaacgtcgaggacctcggc
ctcgaggaactcggcgtcgaggtcgatcgcggattcgtcaccaccgaccagtggtgtcgc
accaccgcattcggcgtgtacgcgatcggtgacgtggcgggcgcaccctgcctcgcccac
aaggcaagccacgaggccgtgctgtgtgtggacaggctcgccggtgcggatcacgtccgg
ccgttggaccgcgactacgttccgggctgtacctatgcgaggccgcaggtcgccagcctc
ggtctcaccgaagaacgagcgcgtgcgaccggccgccgcctccagatcgggcagttcgac
ctgcaggcgtccgggaaggcgctcgcgatcggcgaagccgacggcttcgtgaagacgatc
ttcgacgccgacagcggtgaactcctcggtgcccacatggtcggtccggatgtcaccgag
cagatccagggattcggtatcgctcgatccgtggaggcgaccgccgacgatctcgccgag
gtcgtcttcgcgcacccgacattgtcggaggcgatgcacgaatcggttctggccgcactc
ggccgcccgatcaacatgtag

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