Rhodococcus ruber: CS378_11970
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Entry
CS378_11970 CDS
T05142
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00010
Glycolysis / Gluconeogenesis
rrz00020
Citrate cycle (TCA cycle)
rrz00260
Glycine, serine and threonine metabolism
rrz00280
Valine, leucine and isoleucine degradation
rrz00310
Lysine degradation
rrz00380
Tryptophan metabolism
rrz00620
Pyruvate metabolism
rrz00630
Glyoxylate and dicarboxylate metabolism
rrz00640
Propanoate metabolism
rrz00670
One carbon pool by folate
rrz00785
Lipoic acid metabolism
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01120
Microbial metabolism in diverse environments
rrz01200
Carbon metabolism
rrz01210
2-Oxocarboxylic acid metabolism
rrz01240
Biosynthesis of cofactors
Module
rrz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rrz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rrz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rrz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rrz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CS378_11970 (lpdA)
00020 Citrate cycle (TCA cycle)
CS378_11970 (lpdA)
00620 Pyruvate metabolism
CS378_11970 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CS378_11970 (lpdA)
00640 Propanoate metabolism
CS378_11970 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CS378_11970 (lpdA)
00280 Valine, leucine and isoleucine degradation
CS378_11970 (lpdA)
00310 Lysine degradation
CS378_11970 (lpdA)
00380 Tryptophan metabolism
CS378_11970 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CS378_11970 (lpdA)
00670 One carbon pool by folate
CS378_11970 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrz04147
]
CS378_11970 (lpdA)
Enzymes [BR:
rrz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CS378_11970 (lpdA)
Exosome [BR:
rrz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CS378_11970 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
FAD_oxidored
DAO
HI0933_like
FAD_binding_3
GIDA
Lys_Orn_oxgnase
3HCDH_N
Thi4
AlaDh_PNT_C
NifZ
2-Hacid_dh_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
ATQ29366
LinkDB
All DBs
Position
complement(2677555..2678955)
Genome browser
AA seq
466 aa
AA seq
DB search
MTEKYDVLVVGSGPGGYVAAIRAAQHGLRTAVVERDRLGGICLNWGCIPTKALLHGADVA
HTLANLRPLGFSASGVKFDMGRLVEFSRSVSGRLSDGIGYLMKKNGIDVVRGSARLLDKG
VVAVTAADESVSEYRADHIILATGARPRSVPGVVPDGDRVWTYFDALVPSELPKSLLVIG
SGAIGVEFASLYNDLGTDVTLVEVAPQIMPVEDAAVAGHVRRQFEKRGIRIHTGASVSEL
TVGTNAVTVAVRSADGTIDESTVDRVLVAAGIQGNVEDLGLEELGVEVDRGFVTTDQWCR
TTAFGVYAIGDVAGAPCLAHKASHEAVLCVDRLAGADHVRPLDRDYVPGCTYARPQVASL
GLTEERARATGRRLQIGQFDLQASGKALAIGEADGFVKTIFDADSGELLGAHMVGPDVTE
QIQGFGIARSVEATADDLAEVVFAHPTLSEAMHESVLAALGRPINM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaatacgacgtcctcgtcgtcggcagcgggccgggtggctatgtcgccgcc
atccgcgccgcgcagcacggtctgcgcactgcggtcgtcgagcgggaccggctcggcggg
atctgcttgaactgggggtgcatccccaccaaggcactgctgcacggcgccgatgtcgca
cacacgctggcgaacctgcgtccgctcggattcagcgcgagcggtgtaaaattcgacatg
ggacgcctcgtcgagttcagccggtcggtgtccgggcgactgtccgacggcatcggctac
ctgatgaagaagaacggcatcgacgtcgtccgggggtcggcgcggctgctcgacaagggc
gtcgtcgcagtgacggccgcggacgagtcggtgtccgagtaccgggccgaccacatcatc
ctggccaccggagcccggccgcgatcggtacccggtgtcgtccccgacggtgaccgggtc
tggacgtacttcgatgccctggtcccgtcggagttgccgaagtccttgctggtcatcggc
tccggcgccatcggcgtcgaattcgcgagtctgtacaacgatctcggcaccgacgtcacc
ctcgtcgaggtggctccgcagatcatgccggtcgaggatgccgccgtcgcgggccacgta
cggcggcagttcgagaagcgaggcatcaggattcacaccggcgcctcggtgtccgaactg
acggtcggcacgaacgccgtcaccgtggccgtccggtcggccgacggaacgatcgacgag
tcgaccgtggacagggttctcgttgcggccggaatccagggcaacgtcgaggacctcggc
ctcgaggaactcggcgtcgaggtcgatcgcggattcgtcaccaccgaccagtggtgtcgc
accaccgcattcggcgtgtacgcgatcggtgacgtggcgggcgcaccctgcctcgcccac
aaggcaagccacgaggccgtgctgtgtgtggacaggctcgccggtgcggatcacgtccgg
ccgttggaccgcgactacgttccgggctgtacctatgcgaggccgcaggtcgccagcctc
ggtctcaccgaagaacgagcgcgtgcgaccggccgccgcctccagatcgggcagttcgac
ctgcaggcgtccgggaaggcgctcgcgatcggcgaagccgacggcttcgtgaagacgatc
ttcgacgccgacagcggtgaactcctcggtgcccacatggtcggtccggatgtcaccgag
cagatccagggattcggtatcgctcgatccgtggaggcgaccgccgacgatctcgccgag
gtcgtcttcgcgcacccgacattgtcggaggcgatgcacgaatcggttctggccgcactc
ggccgcccgatcaacatgtag
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