Rhodococcus ruber: CS378_12300
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Entry
CS378_12300 CDS
T05142
Name
(GenBank) hypothetical protein
KO
K16648
arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
CS378_12300
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rrz01003
]
CS378_12300
Glycosyltransferases [BR:
rrz01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CS378_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GT-C_AftD
CBM_AftD
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-ProteinID:
ATQ29425
LinkDB
All DBs
Position
2742849..2747183
Genome browser
AA seq
1444 aa
AA seq
DB search
MSTAAADGAVHATSSRTSHGTAPHPGGAPSADPFSRRWLYGAAVVSLLLAFAQAPGLIVA
DTKYDLTQNPLGFLTRAAHQWSSIAPLGQVQNQAYGYFFPHGSFFAVGQLLHIPPWITQR
VWWALLLLAGFWGVVRLAEALGVGNRGSRLIAAAAFALSPRVLTTLGSISSETLPMMLAP
WVLLPLVRYLDGDGSYSARRAAAPYSARRAAAQSAVAVALMGAINAVATVAACLVAGLWW
LAHRPNRRWWRFTLWWIPACVVAVLWWIVPLLLLGRVSPPFLDYIESSGVTTQWTSLAEV
LRGTDSWTPFVSPERIAGAVLVTQPAAVLVTGLLAAAGLAGLAMRSMPARGRWTLILFAG
IAGLAAGYVGDLGSPIAEQVRHFLDSTGAPLRNVHKLEPLVRLPLVLGLAHLLRRVPLPG
AVPWRQARTAFAHPERQPMVAFATLILVALTLATSLAWTGRLAPRGAYDAVPGYWHETAA
WLDEHTRGERALIVPGAPFGSQIWGLTRDEPLQALASTPWASRDAVPLVPPGAIRALDSV
QRHIADGRPTPGLAATLRGQGIGYVVIRNDLDPETSPSARPVLVHRAIEGSPGLVRVAEF
GNEITRNFEEGFTADSDLRPAYPAVEIYRVDLPGAPVGPYAVDAADVPRVQGGPEALLRL
DDAEPGSTGPALLAADANRAGLPVDDVLVTDTPTARETDYGQVDHHSSAIRAAGDPRRTY
NLVPDYPVPDTDLVHAEWEGARISVSSSASDATQLGGTSVGSGPAATVDGDPTTGWHSNG
LESAVGQWLQLDLDRPLEAGLLRLSTSPGALGPAVKWLEVTTDRGSTAVRVEKPGREQTV
ALPLGRTTWIRITSTRTEDGSVGNQFGLTEVAVDDFTDRDNPRPVDIRQRIVLPDVVAGA
TVRGWNLGQELPGRGGCVDTPDRVRCARGLAVAAEEPNLFTRTLSVPDATSVTPQPWVRA
RPGPALAEIAALPDRVVARGAADVVDLQGSAFAATDGDPRTTWTASEESVRPGAPRPTVT
LDLPSPQLVTGLEVTAGLGPLPARPTRVAVDLGSGPQVRDVESSTTTIDLEPHVTDRVVL
GLVGWEDVLDQTVLGFAKVVPPGLAEVTVLGPDGPIGPQDPVYDRQVTVGCDTGPVLTVD
GRSYRTSVTATVADLAAGVEVPATLCDETVAPLPAGRVDVEIDPGQAFTVGTLRLPVPGA
ASPPAAEPTELAVGTWTENLRELEVPASERDRLVVVPESTNVGWVATAADGTELTPVVVD
GWQQGWVVPAGTGGTVTLEFATDRWYRLGIFGGLLLLLPLFALAAWPRRRPVADPGPSPR
VWGSTTVGFAGVLAVAVLAAGAVGAATTVVAAAAIVAVGARWGRDVAARTLVVVTGCATM
TAMALLSTGPWRAPDGYVGHSVAVQFAALCGLVALGIAALPVSVRARRNLRRVLRWRRRG
SDGA
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacggcagccgctgacggcgccgtccacgcgacgagttcacgcacttcccacggc
acggcaccccaccccggtggggcaccgtccgccgaccccttctccaggcggtggttgtac
ggggccgccgtggtgtcgctgctgctggcgttcgcgcaggcccccggcctgatcgtcgcc
gacaccaagtacgacctgacccagaatcccctcgggttcctcacccgcgccgcccaccag
tggagcagcatcgcgccgctcggccaggtacagaaccaggcgtacggctacttcttcccg
cacggttccttcttcgccgtcggccagctcctgcacatccccccgtggatcacccagcgg
gtgtggtgggcgctgctgctgctcgccgggttctggggcgtggtgcggctcgcggaggcg
ctcggcgtcggtaaccgtggttcccggctgatcgccgcggcggcgttcgcgctctccccc
cgcgtgctgaccaccctgggatccatctcgtcggagacgctgccgatgatgctggcgccg
tgggtgctgctgccgctcgtgcgctacctcgacggcgacgggtcgtattccgctcgacga
gcggcagcgccgtattccgctcgacgagcggcagcgcagtccgccgtcgccgtcgcgctc
atgggtgcgatcaacgccgtcgccaccgtcgccgcgtgcctcgtcgccgggctgtggtgg
ctggcacaccgcccgaaccggcgatggtggcggttcacgctgtggtggatcccggcctgc
gtcgtcgcggtgctgtggtggatcgtgccgctgctgctgctcggccgcgtcagcccgccg
ttcctggactacatcgaatcgtccggggtgaccacgcagtggacctcgctggcggaggtg
ctgcgcggcaccgacagctggaccccgttcgtctcccccgagcgcatcgccggcgcggtg
ctggtcacccagcccgcggcggtcctcgtcaccggtctgctcgcggccgcgggcctggcg
ggactggcgatgcgttcgatgcccgcccgggggcggtggacgctgatcctgttcgccggc
atcgccgggctggccgccgggtacgtcggtgacctcggctcgccgatcgccgagcaggtc
cggcacttcctggattcgaccggcgccccgctgcgcaacgtgcacaagctcgagccgctg
gtgcggttgccgctcgtgctcgggctcgcgcatctgctgcgccgggtgccgctgcccggc
gcggtgccgtggcggcaggcccggaccgcgttcgcgcatcccgagcggcagcccatggtc
gcgttcgccaccctgatcctcgtggcgctgaccctcgcgacgtcgctcgcgtggaccggc
cggctcgccccgcgcggtgcctacgatgcggtgcccggatactggcacgagaccgccgcg
tggctcgacgagcacacccgtggggaacgcgcgctgatcgtgccgggcgcccccttcggc
agccagatctggggcctgacccgcgacgagcccctccaggcgctcgcgtcgacgccgtgg
gcctcccgcgacgccgtgcccctcgtgccgccgggcgcgatccgggccctggactcggtg
cagcggcacatcgccgacggccggcccaccccggggctggcggcgacgctgcgcggtcag
ggcatcgggtacgtggtgatccgcaacgacctcgacccggagacgtcgccgtcggcgcgg
ccggtgctcgtgcaccgggcgatcgagggttcccccgggctggtccgggtcgcggagttc
ggcaacgagatcacccggaacttcgaggagggcttcaccgccgactccgacctgcggccg
gcgtacccggcggtcgagatctaccgcgtggacctgcccggcgctccggtcgggccgtac
gcggtggacgcggccgacgtgccccgggtgcagggcggccccgaggccctgctgcgcctc
gacgacgccgagccgggcagcaccggccccgccctgctcgccgccgacgcgaaccgcgcg
ggtctgcccgtcgacgacgtcctcgtcaccgacacccccaccgcccgtgagaccgactac
ggccaggtcgaccaccacagctcggcgatccgtgccgccggcgacccgcggcgcacctac
aacctcgtaccggactatccggtgccggacaccgacctcgtgcatgccgaatgggagggc
gcccggatcagtgtgtccagctccgcgtccgacgccacccagctcggcggcacctccgtg
ggcagcggaccggcggccaccgtcgacggcgatcccaccaccggctggcacagcaacggc
ctcgagtccgcggtcggccagtggctgcagctcgacctggaccggcccctcgaggccggg
ctgctgcggttgagcaccagccccggcgcgctcggccccgcggtgaaatggctcgaggtg
accaccgaccgcggcagcacggccgtgcgcgtcgagaaacccggccgcgaacagaccgtg
gcgctgccgctcggacggacgacctggatccggatcacctccacccgcaccgaggacggg
tcggtgggcaaccagttcgggctgaccgaggtggcggtggacgacttcaccgaccgcgac
aacccccggccggtcgacatccggcagcggatcgtgctgccggacgtcgtcgccggggcg
acggtgcggggctggaatctcggtcaggaactgcccggccgcggcggctgcgtcgacacc
cccgatcgggtgcggtgtgcgcggggtctggccgtcgcagccgaggagccgaacctcttc
acccgcaccctgtcggtgcccgacgcgacgtcggtgacgccgcaaccgtgggtgcgggcc
cggcccggcccggccctcgccgagatcgccgcgctgccggaccgggtggtcgcccgcggc
gccgccgacgtcgtcgacctgcagggctccgcgttcgccgcgaccgacggtgatccgcgc
accacgtggacggcgtcggaggagtcggtgcgccccggcgcgccgcgaccgaccgtcacg
ctcgacctgccgtccccgcagctggtgaccggcctggaggtgaccgcgggcctgggaccg
ctgccggcgcgcccgacccgcgtcgccgtcgacctcggcagcggaccgcaggtgcgcgac
gtcgaatcatcaacgacgacaattgatctcgaaccacacgtgacggatcgggtggtgctc
ggcctggtcggctgggaggacgtgctggaccagacggtgctcggcttcgcgaaggtcgtc
ccgccgggtctggcggaggtgaccgtcctcggcccggacggtccgatcggtccgcaggat
ccggtgtacgaccggcaggtcacggtcggctgcgacaccgggcccgtgctcaccgtcgac
ggacgcagctaccggacctcggtcaccgcgaccgtcgcggacctcgccgccggtgtcgag
gtgccggccaccttgtgcgacgagaccgtcgcgccgctgcccgccgggcgcgtcgacgtc
gagatcgacccgggccaggcgttcaccgtcgggacgctgcggctcccggttcccggcgcc
gcgagcccgccggcagccgaacccaccgaactcgccgtcggcacctggacggagaacctg
cgcgagctcgaggtgcccgcgtccgaacgggaccggctcgtcgtcgtgccggagagcacc
aacgtcggctgggtcgccacggccgcggacggcaccgaactgacacccgtggtggtcgac
ggctggcagcagggctgggtcgtgcccgccgggaccggcggcaccgtgaccctcgaattc
gccaccgaccggtggtatcgcctcggcatcttcggcggcctgctcctgctgctgccgctg
ttcgcgctcgcggcgtggccgcgccggcgccccgtcgccgatccggggccgtcgccccgg
gtctggggcagtaccaccgtcggcttcgccggcgtgctggccgtcgcggtcctcgcggcc
ggcgcggtgggcgcggcgacgacggtcgtggcggcagcggcgatcgtggcggtgggcgcc
cgctggggccgcgacgtggctgcccgcacgctggtcgtcgtgaccggatgcgccaccatg
acggcgatggcgttgctgtccaccgggccgtggcgggcgccggacggctacgtcgggcac
tcggtcgccgtccagttcgccgcgctgtgcgggctcgtcgcgctgggaatcgcggcgctg
ccggtctcggtcagggcgcggcggaatctgcgacgcgttctgcggtggaggcgacgcggc
tctgacggcgcctga
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