Rhodococcus ruber: CS378_13005
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Entry
CS378_13005 CDS
T05142
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03030
DNA replication
rrz03430
Mismatch repair
rrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CS378_13005
03430 Mismatch repair
CS378_13005
03440 Homologous recombination
CS378_13005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrz03032
]
CS378_13005
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_13005
Enzymes [BR:
rrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CS378_13005
DNA replication proteins [BR:
rrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CS378_13005
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CS378_13005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ig_halo
Motif
Other DBs
NCBI-ProteinID:
ATQ31922
UniProt:
A0A098BTK6
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All DBs
Position
2899852..2900532
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AA seq
226 aa
AA seq
DB search
MTHWPDRPICAFDLETTDRDPRVARIVTASVVVLDGDTVSSRTWLLDPGIEISEETAAIH
GVTTERARAEGLEYTAGYTQIREALCEAWVRDHIVVAFNASYDLTVVDAEGRRLGLPGLE
TGLVFDPYVVDREMDRDREGSRTLQAVCDAYGIALTAAHQAEADALAAGQLARALCTRFP
QLADLDIMTDQAAWHAERQRTFAEYLAGLGRDVSDVDPQWPIRGIA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacgcactggcccgatcgaccgatctgcgcgttcgacctcgagaccaccgaccgcgat
ccgcgggtcgcgcgcatcgtgactgcgtccgtcgtcgtcctcgacggcgacaccgtctcg
tcgcggacgtggctgctcgatccgggcatcgagatctcggaggagacggcggcgatccac
ggcgtgaccacggagcgggcgcgcgccgagggcctcgagtacacggccggctacacccag
atccgcgaggcgctgtgcgaggcgtgggtccgcgatcacatcgtcgtggcgttcaacgcc
agttacgacctcacggtggtcgacgccgagggccgccggctgggcctgccgggactcgag
acgggcctggtgttcgacccgtacgtcgtcgaccgcgagatggaccgcgaccgcgagggc
agccgcaccctgcaggcggtctgcgatgcgtacggcatcgcgctgaccgccgcgcatcag
gccgaggcggacgccctcgcggcggggcaactggcgcgggcgctgtgcacccgcttcccg
cagctcgccgacctggacatcatgacggaccaggcggcctggcacgcggagcggcaacgc
acgttcgccgagtatctcgcgggtctcgggcgcgacgtgtcggatgtggacccgcagtgg
cccattcgcggtatcgcttga
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