KEGG   Rhodococcus ruber: CS378_13005
Entry
CS378_13005       CDS       T05142                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rrz  Rhodococcus ruber
Pathway
rrz03030  DNA replication
rrz03430  Mismatch repair
rrz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rrz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CS378_13005
   03430 Mismatch repair
    CS378_13005
   03440 Homologous recombination
    CS378_13005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rrz03032]
    CS378_13005
   03400 DNA repair and recombination proteins [BR:rrz03400]
    CS378_13005
Enzymes [BR:rrz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CS378_13005
DNA replication proteins [BR:rrz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CS378_13005
DNA repair and recombination proteins [BR:rrz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CS378_13005
SSDB
Motif
Pfam: RNase_T Ig_halo
Other DBs
NCBI-ProteinID: ATQ31922
UniProt: A0A098BTK6
LinkDB
Position
2899852..2900532
AA seq 226 aa
MTHWPDRPICAFDLETTDRDPRVARIVTASVVVLDGDTVSSRTWLLDPGIEISEETAAIH
GVTTERARAEGLEYTAGYTQIREALCEAWVRDHIVVAFNASYDLTVVDAEGRRLGLPGLE
TGLVFDPYVVDREMDRDREGSRTLQAVCDAYGIALTAAHQAEADALAAGQLARALCTRFP
QLADLDIMTDQAAWHAERQRTFAEYLAGLGRDVSDVDPQWPIRGIA
NT seq 681 nt   +upstreamnt  +downstreamnt
atgacgcactggcccgatcgaccgatctgcgcgttcgacctcgagaccaccgaccgcgat
ccgcgggtcgcgcgcatcgtgactgcgtccgtcgtcgtcctcgacggcgacaccgtctcg
tcgcggacgtggctgctcgatccgggcatcgagatctcggaggagacggcggcgatccac
ggcgtgaccacggagcgggcgcgcgccgagggcctcgagtacacggccggctacacccag
atccgcgaggcgctgtgcgaggcgtgggtccgcgatcacatcgtcgtggcgttcaacgcc
agttacgacctcacggtggtcgacgccgagggccgccggctgggcctgccgggactcgag
acgggcctggtgttcgacccgtacgtcgtcgaccgcgagatggaccgcgaccgcgagggc
agccgcaccctgcaggcggtctgcgatgcgtacggcatcgcgctgaccgccgcgcatcag
gccgaggcggacgccctcgcggcggggcaactggcgcgggcgctgtgcacccgcttcccg
cagctcgccgacctggacatcatgacggaccaggcggcctggcacgcggagcggcaacgc
acgttcgccgagtatctcgcgggtctcgggcgcgacgtgtcggatgtggacccgcagtgg
cccattcgcggtatcgcttga

DBGET integrated database retrieval system