Rhodococcus ruber: CS378_13290
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Entry
CS378_13290 CDS
T05142
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00010
Glycolysis / Gluconeogenesis
rrz00020
Citrate cycle (TCA cycle)
rrz00620
Pyruvate metabolism
rrz00650
Butanoate metabolism
rrz00720
Other carbon fixation pathways
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01120
Microbial metabolism in diverse environments
rrz01200
Carbon metabolism
rrz01210
2-Oxocarboxylic acid metabolism
Module
rrz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CS378_13290 (nifJ)
00020 Citrate cycle (TCA cycle)
CS378_13290 (nifJ)
00620 Pyruvate metabolism
CS378_13290 (nifJ)
00650 Butanoate metabolism
CS378_13290 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
CS378_13290 (nifJ)
Enzymes [BR:
rrz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CS378_13290 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4
Fer4_7
TPP_enzyme_C
Fer4_21
Fer4_2
Fer4_6
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_16
Fer4_15
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ATQ29603
LinkDB
All DBs
Position
complement(2957364..2960936)
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AA seq
1190 aa
AA seq
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MTRATVDGNEAAVSVAYRLNEVCCIYPITPSSAMAELADEWSSRHRPNLWGTVPSVVEMQ
SEGGAAGALHGALQGGALATTFTASQGLLLMIPNMYKIAGELTSAVMHVAARSLAAQGLS
IFGDHSDVMAVRQTGFALLASASVQEAHDLALVAQAATLRTRVPFVHFFDGFRTSHELNT
IETLTDDDLRALVPEELIHEHRGRALSPERPFIRGTAQNPDTYFQARETVNPFYARVPAV
VDELMAQLGERTGRGLRIVQYAGHPEAERVLVLMGSGAQTASDTAAALAARGERVGVVQV
RLYRPFPAEALLAALPATVRTIGVLDRTKEPGSHGEPLYLDVVAALAEAHADGERAVMPR
ICGGRYGLSSKEFTPGMVAGVFAELAREGPRRRFTVGIDDDVSGTSITYDPSFDIESPDT
VRAIFYGLGSDGTVGANKNTIKILGDEEHLHAQGYFVYDSKKSGSQTVSHLRFGPRPIRA
PYLVSRADLVGCHQFRFLDKIDVLGPAAPGATLLLNCRHRPDKVWDALPRRVQEQILDKG
ITLYAVDAGRIAREVGLAGRINVVLQTCFFAISDVLPREQAVARIKKSVEKTYGNRGADV
LRRELAAVDRALDELHRIEVPGRVTTTRVPAPIVPEHAPEFVRTVTAEMMAGRGDALPVS
AFPVDGTYPSGTTAYEKRNISELVAAWDPDTCIQCGNCSFACPHSVIRTKFYDKSHLDGA
PEQFGSAALGAVGLPDARYTLQVYAEDCTGCGLCVEACPAVTPGATVTKAINLAPREPRV
AAERENIAFFETLPTADRARVDFGTVRGTQFLEPLFEFPGACAGCGETPYLKLLSQLFGD
RLMIANATGCSSIYGGNLPTTPWATNADGRGPAWSNSLFEDNAEFGLGFRLAADEHTRLA
RRRLTELREAVGADLVDSILTAPQLRESELRAQRERVAELETLLAELDPTTTADLRSVLD
HLVRRSVWIVGGDGWAYDIGAGGLDHVLASGHNVNVLVLDTEVYSNTGGQMSKATPLGAI
AKFAAAGKTVPMKDIALQAIAYGNVYVARVAMGADPQHTLQAMREAEAYEGPSLVIAYSQ
CIAHGIDMRHGMDQQYRAVASGHWPLIRYDPVLRAAGENPFLLDSHRPRIPLEDYRSREL
RYRALANTDPAEYDRLLGLAEEAIAQRWDRYEDMASQGSHHFTADARKDR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgccacggtggacggaaacgaggcggccgtgtcggtcgcctaccggctcaac
gaagtgtgctgcatctatccgatcaccccgtcgtcggcgatggccgagctggccgacgaa
tggtccagccggcaccggccgaacctgtggggcaccgtgccgagtgtggtggaaatgcag
agcgagggcggcgcggcgggcgcgctgcacggcgcgctgcagggcggggcactggcgacg
acgttcaccgcgtcgcagggcctgctgctgatgatcccgaacatgtacaagatcgccggc
gagctgacctcggcggtcatgcatgttgcggcccggtccctggccgcgcagggactgtcg
atcttcggggaccattcggacgtgatggcggtgcgccagaccgggttcgcgctgctcgcc
tcggcctcggtgcaggaagcacacgacctggcgctggtggcgcaggccgcgaccctgcgg
acgcgggtgccgttcgtccacttcttcgacggcttccgcacctcgcacgagctcaacacc
atcgagacgctgaccgacgacgacctgcgggcactggtgcccgaggaactgatccacgag
catcgcggacgcgcgttgtcgccggagcggccgttcatccggggcaccgcgcagaacccg
gacacctacttccaggcacgggagacggtcaacccgttctacgcccgggttccggcggtg
gtggacgagctgatggcgcagttgggtgagcgcaccggccgcggcctgcgcatcgtccag
tacgccgggcaccccgaggcggaacgggtgctggtcttgatgggatccggggcgcagacc
gcatccgacaccgctgccgcgctcgccgcccgcggtgagcgcgtcggggtggtgcaggtg
cggctgtaccgaccctttcccgccgaggcgctgctggcggcgctgccggcgacggtgcgc
acgatcggcgtgctggaccgcaccaaagagcccgggtcgcacggcgagccgctgtatctc
gacgtcgtcgcggccctcgcggaggcacatgccgacggtgagcgagccgtcatgccccgg
atctgcggcggccgctacggcctgtcgtcgaaggagttcacgcccgggatggtggccggc
gtcttcgccgagctcgcccgtgaggggccccgacgccggttcaccgtcggcatcgacgac
gacgtgtccggcaccagcatcacctacgacccgtccttcgacatcgaatcccccgacacc
gtgcgggcgatcttctacggcctgggctcggacgggaccgtcggggccaacaagaacacc
atcaagatcctcggcgacgaggaacacctgcacgcgcagggctacttcgtctacgactcg
aagaagtccggctcgcagaccgtctcgcatctgcgtttcggaccgcggcccatccgcgca
ccgtatctggtgagccgcgcggacctcgtcggctgccatcagttccgattcctcgacaag
atcgacgtcctgggaccggccgcaccgggagcgaccctgctgctgaactgcagacaccgg
ccggacaaggtctgggacgcgctgccccgccgggtccaggaacagatcctcgacaagggg
atcacgctgtacgccgtcgacgcgggccggatcgctcgcgaggtcgggctcgccgggcgg
atcaacgtcgtgctgcagacctgcttcttcgcgatctcggatgtgctgccgcgtgagcag
gccgtcgcccggatcaagaagtcggtggagaagacctacggcaaccgtggagccgacgtg
ctgcgacgcgaactggccgcggtggaccgggcgttggacgagctgcaccggatcgaggtg
cccggccgggtgaccaccacccgagtaccggcgccgatcgtgccggagcacgcgcccgag
ttcgtccgcaccgtcaccgcggagatgatggccgggcgtggggatgccttgccggtcagc
gcgtttcccgtcgacgggacctatccgagcggcaccaccgcctacgagaagcgcaacatt
tcggaactggtcgcagcatgggacccggacacctgcatccagtgcggaaactgcagtttc
gcctgtccgcacagcgtgatccgcaccaagttctacgacaaatcccacctggacggtgcc
ccggagcagttcggctcggcggcactgggggccgtgggtctgccggatgcccggtacacc
ctgcaggtctacgccgaggactgcaccgggtgcgggctgtgcgtcgaggcctgtcccgcc
gtgactcccggcgcgacggtcaccaaggccatcaacctcgcaccccgcgaaccgcgagtg
gccgccgaacgcgagaacatcgccttcttcgagacgctgccgacggccgaccgggcccgg
gtggacttcggcaccgtccgcggaacgcagttcctcgagccgctgttcgaatttcccggc
gcctgcgcgggctgcggggagaccccgtacctcaagctgctctcccaactgttcggcgac
cggttgatgatcgcgaacgccacgggctgctcgtcgatctacggcggcaatctgcccacc
accccctgggcgaccaacgcggacggacgcggccccgcctggtccaactcgctgttcgag
gacaacgccgaattcgggctggggttccggctggccgccgacgagcacacccggctcgcc
cggcggcgcctgaccgaactacgggaggcggtcggtgccgacctcgtcgacagcatcctg
acggcgccgcaactgcgcgagtccgagctgcgcgcccagcgggaacgagtcgccgaactc
gaaacccttctcgcagagcttgatccgaccacgaccgccgacctgcgcagtgtgctcgac
cacctggtgcggcgcagcgtgtggatcgtcggcggcgacggctgggcctacgacatcggt
gccgggggtctcgaccacgtcctggccagcggtcacaacgtcaacgtcctggtcctcgac
accgaggtgtattccaacaccgggggacagatgtccaaggccaccccgctcggcgcgatc
gcgaagtttgccgcagccggcaagacggttccgatgaaagacattgcgttgcaggccatc
gcctacggcaacgtctacgtcgcccgggtcgcgatgggtgccgatccgcagcacaccttg
caggcgatgcgggaagccgaagcctacgagggcccgtcgctcgtcatcgcctacagtcag
tgcatcgcgcacggtatcgacatgcgtcacgggatggaccagcagtaccgcgcggtggcc
agcgggcactggccgctgatccgctacgacccggtgttgcgggcggccggggagaatccg
ttcctgctcgattcgcaccggccgaggattccgctcgaggactaccgcagccgcgagctg
cggtaccgcgcgctcgccaacaccgacccggcggaatacgaccggcttctcggcctcgcc
gaagaggcgatcgctcagcgctgggaccggtacgaggacatggcatcgcaagggtcgcac
cacttcaccgccgacgcccgcaaggatcgctga
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