Rhodococcus ruber: CS378_13430
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Entry
CS378_13430 CDS
T05142
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CS378_13430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrz03000
]
CS378_13430
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_13430
Enzymes [BR:
rrz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CS378_13430
Transcription factors [BR:
rrz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CS378_13430
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CS378_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ATQ29627
LinkDB
All DBs
Position
complement(2987951..2988808)
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AA seq
285 aa
AA seq
DB search
MSVVLRPTVTPPLAAAPMLAALRSHTVAGLERHDADTGTHVRSVRGRYGPTVVAIRPGSE
HVSVRIDADRRDLPEVEQTVRRWLDLDADPAVIDAALGADPYLAPMVAARPGLRVLGTTD
WFDTAVQTVLGQQVSVAAAATFAGRLVARYGDPGRDGLLCFPLPTGLVGADPHELQAAVG
LTGARVRTVLALARAAADGLDPSDPVRFRRDLLGLPGIGPWTVDYLAVRVLGDRDACPVG
DLVLRRALGVDTAREVTVRTRRWSPWRAYASFHLWTHAAYDSSAP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgtcctgcggccgaccgtgacgccgccgctggccgcggcgccgatgctcgcc
gcgctgcgcagccacaccgtcgccggtctcgaacggcacgacgcggacacgggcacgcac
gtccggtcggtgcgggggcggtacggtcccacggtggtcgcgatccgtcccggctccgag
cacgtgtccgtccggatcgacgcggatcgtcgcgacctacccgaggtggagcagacggtc
cggcggtggctggacctcgatgccgacccggccgtgatcgacgcggcgctcggcgccgat
ccgtacctcgcgccgatggtggcggcccggccgggactgcgcgtgctcgggacgacggac
tggttcgacaccgccgtccagacggtgctgggacagcaggtcagcgtcgcggcggccgcc
acgttcgccggccgcctcgtcgcccgctacggcgatccgggacgcgacggcctgctctgc
ttcccgttgccgaccgggctcgtcggtgcggacccgcacgaactgcaggcggccgtgggg
ctgaccggcgcccgggtgcgtaccgtgctcgcgctcgcccgcgccgcggccgacggtctc
gatccgtccgaccccgtgcggttccgccgggaccttctcggactgccgggaatcgggccg
tggaccgtggactacctcgccgtgcgcgtgctcggggaccgcgacgcgtgtcccgtcgga
gatctggtgctgcgcagggccctcggcgtggataccgcccgcgaggtgacggtccggacg
cggcggtggagtccgtggcgggcctacgcctcattccacctgtggacgcacgccgcctac
gactcgtccgcgccgtag
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