Rhodococcus ruber: CS378_16460
Help
Entry
CS378_16460 CDS
T05142
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rrz
Rhodococcus ruber
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_16460
Enzymes [BR:
rrz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CS378_16460
DNA repair and recombination proteins [BR:
rrz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CS378_16460
Prokaryotic type
CS378_16460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATQ30180
LinkDB
All DBs
Position
complement(3636931..3638295)
Genome browser
AA seq
454 aa
AA seq
DB search
MSRPGIVWFRRDLRLRDLPTLLSVADSTDRALALFVLDESLLRPSGSPRRTFLMRCLRAL
DEDLGGRLLVTHGDPATVVPALARELDADAVHVSADRGPYGTRRDDAVERALGDVPLLRT
GSPYAVAPGRIRKSDDTPYKVFTPFQRAWHEHGWRAPAVTDAGTVDWIDPGGLDARVPIP
ADDDLDGATLPPAGEAAALHRWHEFRDDDLPHYDTDRDRPDLDRTSRLSPYLKFGCIHPR
TLLHDVRSERSAGANRLRSELAWRDFYADVLYHRPDTARRNYNRRFDDIAYDRGPDAERN
FAAWKQGRTGFPIVDAGMRQLLAEGWMHNRLRMIVASFLAKDLHLPWWWGARHFMDRLVD
GDLASNQHGWQWTAGSGTDAAPYFRVFNPLTQGEKFDPTGEYVRRWVPELRGVDGKRVHR
LPDGPPDGYPEPIVDHAHERQVALDRYGRIGGKG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgccccggtatcgtctggttccgccgcgacctgcggctgcgggacctgcccacc
ctgctgtccgtcgccgactccaccgaccgtgccctcgccctgttcgtgctcgacgagtcg
ctgctgcgtccctccggttccccgcgccgcaccttcctgatgcggtgcctgcgcgccctc
gacgaggatctcggcggccgtctgctcgtcacccacggcgaccccgccacggtcgttccg
gcgctggcccgggaactcgacgccgacgcggtgcacgtcagtgccgaccgcggaccgtac
ggcacccgccgcgacgacgccgtcgagcgggcgctcggcgacgtcccgctgctgcgcacc
ggctcgccctacgccgtcgcccccggccgcatccgcaagagcgacgacaccccctacaag
gtgttcacccccttccaacgggcgtggcacgagcacggctggcgcgcacccgccgtcacc
gacgccggcaccgtcgactggatcgaccccggcggtctcgacgcgcgcgtaccgatcccc
gccgacgacgacctcgacggcgccacgctgccgcccgccggtgaggcggccgcgctgcac
cgctggcacgagttccgcgacgacgacctgccgcactacgacaccgaccgggaccggccc
gatctcgatcgcaccagccgtctctcgccgtacctgaaattcgggtgcatccatccgcgc
accctcctgcacgacgtgcgctccgagcgcagcgcgggcgcgaaccgtctgcgcagcgaa
ctggcctggcgcgacttctacgcggacgtgctgtaccaccggcccgacacggcccgccgc
aactacaaccgccgcttcgacgacatcgcctacgaccgcggccccgacgccgaacgcaac
ttcgccgcatggaagcagggccgcaccggcttccccatcgtcgacgcgggcatgcggcag
ttgctcgccgagggctggatgcacaaccggctccggatgatcgtcgcgtccttcctcgcc
aaggatctgcatctgccctggtggtggggtgcccggcacttcatggaccggctcgtcgac
ggcgacctggcctcgaatcagcacgggtggcagtggaccgcgggcagcggtaccgacgcc
gcgccctacttccgggtgttcaacccgctcacgcagggggagaagttcgatccgacgggt
gaatacgtgcgccgctgggtacccgaactgcgaggtgtggacggcaaacgcgtgcaccgg
ctcccggacggcccgccggacgggtaccccgagccgatcgtcgaccacgcccacgaaaga
caggtggcgctcgaccgctacgggcggatcggcggaaaaggctga
DBGET
integrated database retrieval system
