Rhodococcus ruber: CS378_17785
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Entry
CS378_17785 CDS
T05142
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00521
Streptomycin biosynthesis
rrz00523
Polyketide sugar unit biosynthesis
rrz00525
Acarbose and validamycin biosynthesis
rrz00541
O-Antigen nucleotide sugar biosynthesis
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01250
Biosynthesis of nucleotide sugars
Module
rrz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CS378_17785 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CS378_17785 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CS378_17785 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CS378_17785 (rfbB)
00525 Acarbose and validamycin biosynthesis
CS378_17785 (rfbB)
Enzymes [BR:
rrz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CS378_17785 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATQ30409
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Position
3926562..3927578
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AA seq
338 aa
AA seq
DB search
MRLLVTGGAGFIGANFVHRTVADRPEAQVTVLDKLTYAGNLASLDPVAEQVRFVRGDVAD
ADLVDELVAESDLVVHFAAESHNDNSLADPSPFVQTNLMGTFTLLEAVRRHAVRYHHIST
DEVYGDLDLDDPARFTEATAYNPSSPYSSTKAGSDLLVRAWVRSFGVAATISNCSNNYGP
YQHVEKFIPRQITNVLDGVRPRLYGTGANVRDWIHVDDHNRAVWTIIDKGEIGQTYLIGA
DGETDNRTVVETVLELCGRDRTDFDFVTDRPGHDLRYAIDATRLRTELGWQPRYRDFREG
LAATIEWYRTHEHWWRPQKDATEQAYARSGERTLGRAD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctcgtcaccggcggtgccggtttcatcggtgcgaacttcgtgcatcggacc
gtcgccgaccgccccgaggcgcaggtgacggtgctcgacaagctcacctacgccggcaac
ctcgcctccctcgacccggtcgccgagcaggtccgcttcgtccgcggcgacgtcgccgac
gccgacctggtggacgagctggtggccgagtcggatctggtggtgcacttcgccgccgaa
tcgcacaacgacaactccctggccgatccgtcgccgttcgtgcagaccaacctgatgggc
acgttcaccctgctcgaggcggtgcgccggcatgcggtgcgctaccaccacatctccacc
gacgaggtgtacggcgatctcgacctcgacgatccggcgcggttcaccgaggccaccgcc
tacaacccgtcgagcccgtactcctcgaccaaggccggctcggatctgctggtgcgggcg
tgggtgcgctcgttcggggtggcggcgacgatctcgaactgctcgaacaactacgggccg
taccagcacgtggagaagttcatcccgcggcagatcaccaacgtcctcgacggggtgcgg
cccaggctgtacggcaccggggcgaacgtgcgggactggatccacgtcgacgaccacaac
cgggcggtgtggacgatcatcgacaagggcgagatcgggcagacctacctgatcggcgcg
gacggggagaccgacaaccgcaccgtcgtcgagaccgtcctcgagctgtgcggcagggac
cgcaccgacttcgacttcgtcaccgaccggcccggccacgacctgcgctacgcgatcgac
gcgacccggctgcgcaccgaactcggctggcagccccgctaccgggacttccgggagggg
ctggccgcgacgatcgagtggtaccgcacccacgagcactggtggcgaccccagaaggac
gccaccgaacaggcctacgcccgatccggcgagcgcacactcggccgagccgactga
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