Rhodococcus ruber: CS378_18245
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Entry
CS378_18245 CDS
T05142
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz03030
DNA replication
rrz03430
Mismatch repair
rrz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CS378_18245
03430 Mismatch repair
CS378_18245
03440 Homologous recombination
CS378_18245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrz03032
]
CS378_18245
03400 DNA repair and recombination proteins [BR:
rrz03400
]
CS378_18245
Enzymes [BR:
rrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CS378_18245
DNA replication proteins [BR:
rrz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CS378_18245
DNA repair and recombination proteins [BR:
rrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CS378_18245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_30
Mg_chelatase
AAA_19
Rad17
AAA_16
DnaX_C
AAA_14
DEAD
AAA_18
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
ATQ30479
LinkDB
All DBs
Position
4019323..4021509
Genome browser
AA seq
728 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSIALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CAEGPTSAPCGTCRSCVALGPGGGGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
IFIVDEAHMVTTQGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLPPP
VMRGLLEKICTQENVPVEDAVYPLVIRAGGGSPRDSLSVMDQLLAGAGEEGVTYSRALAL
LGVTDVALIDEAVDALAAGDGAGLFGTVEKVMDAGHDPRRFAVDLLERLRDLILMRSVPD
AAERGLVDAPGDVLERMREEADRIGPATLTRYAEIVHSGLGEMRGATAPRLLLEVMCARM
LLPAASDSESAVLQRLERLESGIAAAPPGAAAPGTAPPSVAPRAVPPVPAAPAPIAPDEP
AARFQRPSQRRAAPAAPVVEPAPVVEPAAEPVPAPPSETPSVAAAPAREPEPAPRPVVRE
PVREPEPAPRPVVREPEPTEPEPGPQPAPAPAAAAGPDAAAVRAVWSEVRSKVRERSRTV
EVMLSGATVRSVDAGRIVLGHDSAPLVKRLVEPRNAAVIADALRAVFGVDFEVTCVQGAA
TPPTAAKPAAAQSASRPSGQPRFSRPSQARQAQPAPQPGGASPAATPAPPRPEADDIPPP
EAPDYPDDPGPEPGYEPPRISPADVTAEDEEEMFAEAATPVDPSTRREPEDVAIELLQDI
LGAKKISE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggccctctaccgtaagtaccgaccggcgacctttgccgaggtggtgggtcaggagcac
gtcaccgagcccctgagcatcgccctcgacgccggtcgcatcaatcacgcgtatctgttc
tcgggcccccgcggctgcggcaagacctcctcggcccggatcctggcgcgctcgctgaac
tgcgcggagggtccgacgtcggcgccgtgcgggacgtgccggtcctgcgtggcgctcggt
cccggcggtggcggcaacctcgacgtcatcgaactcgacgccgcgagccacggcggcgtc
gacgacacccgcgaactgcgcgaccgcgccttctacgcgccggccgagtcgcggtaccgc
atcttcatcgtcgacgaggcccacatggtcaccacgcagggcttcaacgccctgctcaag
atcgtcgaggagccaccggagcacctgatcttcgtgttcgccacgaccgaaccggagaag
gtgctgccgacgatccgctcgcgcacccaccactatccgttccgcttgctgccgcccccg
gtcatgcgcgggctgctcgagaagatctgcacgcaggagaacgtgccggtcgaggatgcc
gtctacccgctggtgatccgtgcgggcgggggctcgccgcgcgactcgctgtccgtgatg
gaccagctcctcgccggcgccggcgaggagggcgtgacctacagccgggcactcgcgctg
ctcggggtcaccgacgtcgccctcatcgacgaggccgtggacgccctcgccgccggcgac
ggggcgggactgttcggaaccgtcgagaaggtgatggacgccggccacgacccacgacgg
ttcgcggtcgacctgctcgagcggctccgtgacctcatcctgatgcggtcggtgcccgac
gccgccgagcgcggtctcgtcgacgcgcccggtgacgtgctcgagcggatgcgggaggaa
gccgaccggatcggtcccgccaccctgacccggtacgcggagatcgtgcactccggcctc
ggcgagatgcgcggggccacggcgccgcgcctgcttctcgaggtgatgtgcgcgcggatg
ctgctgccggccgcgtccgattcggaatcggctgtcctgcaacgtctcgagcgtctcgaa
agcgggatcgcggcagcgccgccgggcgccgctgcgccgggcactgcgccgccgagcgtc
gcgccgcgggccgtcccgccggtcccggccgcgcccgcgccgatcgcgcccgacgagccg
gccgccaggttccagcgtccctcccagcggcgggcagcaccggccgcacccgtcgtcgag
cccgcacccgtcgtcgagcccgcggccgagccggtcccggcgccaccgtcggaaacaccg
tcggttgccgccgcgccggcacgtgaaccggagccggcaccacggcccgtcgtacgggag
cccgtgcgggaaccggagcctgcgcctcgccccgtcgtgcgggaaccggaaccgaccgag
ccggaacccggaccgcagcccgcgccggcgcccgccgcggccgccggacccgacgccgcc
gccgtccgcgcggtgtggtccgaggtccgcagcaaggtccgcgagcgcagccgcaccgtc
gaggtcatgctgtccggtgccacggtccgcagcgtggacgcgggccgcatcgtcctcggc
cacgattccgctccgctggtcaaacggctcgtcgaaccgcgcaacgccgcggtgatcgcg
gacgccctgcgggcggtgttcggggtggacttcgaggtgacctgcgtccagggcgctgcg
acaccccccaccgctgcgaaaccggccgcggcccagtcggcgtcgcgcccctccggtcag
ccgcggttctcccggcccagccaggcgcggcaggcccagcccgccccgcagccgggcggg
gcgtctccggccgccacccccgctccgccgcgtcccgaggccgacgacatcccaccgccc
gaggcgccggactacccggacgaccccggccccgagcccggctacgagcctccgcggatc
agccccgccgacgtcaccgccgaggacgaggaggagatgttcgccgaggccgccaccccg
gtcgacccgtcgacgcggcgcgaaccggaggacgtggcgatcgagttgctgcaggacatc
ctgggagcgaagaagatcagcgaatga
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